Rapid cell type search

using marker genes

Annotate cell types in your single-cell and spatial RNA-seq data with the largest reference database of cell markers.

Rapid cell type search

using marker genes

Annotate cell types in your single-cell and spatial RNA-seq data with the largest reference database of cell markers.

Rapid cell type search

using marker genes

Annotate cell types in your single-cell and spatial RNA-seq data with the largest reference database of cell markers.

Rapid

cell type search

using

marker genes

Annotate cell types in your single-cell and spatial RNA-seq data with the largest reference database of cell markers.

Use the largest reference database of cell types
CellKb is a knowledgebase of cell type marker gene sets manually collected and curated from scientific literature. All cell types are annotated with cell, anatomical structure and disease ontologies, and integrated with protein-protein interaction networks.
Gene sets
37,571
Cell Types
2,812
Publications
774
Species
10

CellKb CellKb v2.2.3 Updated: 11 Aug 2022

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Annotate cell types in single cell and spatial RNA-seq data
CellKb helps scientists rapidly search through published literature to find matching cell types associated with known cell marker genes, saving significant time and money.
Search cell types using marker genes
Search cell types with keywords
Search cell types by ontology
Search cell types across species
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Our users
Scientists all over the world are using CellKb to gain actionable insights from their single-cell and spatial RNA-seq data.
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400+ organizations
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