Cell type markers
99,467 Marker Gene Sets
- The marker gene sets for cell types are collected directly from publications describing mainly single-cell, and selected bulk RNA-seq or microarray experiments.
- Each marker gene set has extensive cell type, anatomical structure and disease annotations as described in the publication.
- Protein-protein interactions from HitPredict are integrated into CellKb.
- Reliability scores are calculated for each cell type marker gene set.
- Consensus signatures are calculated for each cell type in every tissue, disease and condition.
For more details about our data collection and curation methods, please refer to our preprint:
CellKb Immune: a manually curated database of mammalian hematopoietic marker gene sets for rapid cell type identification. biorxiv, 2020.
CellKb Immune: a manually curated database of mammalian hematopoietic marker gene sets for rapid cell type identification. biorxiv, 2020.
The CellKb advantage
CellKb provides extensive search capabilities, more data and regular updates compared to other cell type marker databases, in addition to:
- Manual curation of all data and annotations.
- Multiple marker gene sets for every cell type with information about publication, disease, tissue and experimental conditions, and reliability scores.
- Marker gene sets from single-cell and bulk RNA-seq experiments.
- Canonical markers for cell types.
- Consensus signatures for every cell type in different tissues and disease conditions.
- Cell type specific protein-protein interaction networks.
1,433 Publications
Contents
The data contained in the latest version of CellKb is listed below. CellKb Release Notes provides more information about the features released in previous versions.
| Species | Marker gene sets |
|---|---|
| Homo sapiens | 47831 |
| Mus musculus | 39020 |
| Danio rerio | 4085 |
| Drosophila melanogaster | 3477 |
| Macaca fascicularis | 1449 |
| Caenorhabditis elegans | 1021 |
| Macaca mulatta | 876 |
| Rattus norvegicus | 723 |
| Arabidopsis thaliana | 557 |
| Callithrix jacchus | 205 |
| Pan troglodytes | 164 |
| Oryza sativa | 35 |
| Gorilla gorilla | 24 |
| Disease | Marker gene sets |
|---|---|
| abdominal aortic aneurysm | 17 |
| achalasia | 93 |
| acinar cell carcinoma | 1 |
| acral lentiginous melanoma | 13 |
| actinic keratosis | 3 |
| acute kidney failure | 350 |
| acute leukemia | 3 |
| acute lymphoblastic leukemia | 22 |
| acute megakaryocytic leukemia | 1 |
| acute monocytic leukemia | 3 |
| acute myeloid leukemia | 258 |
| acute myeloid leukemia with MLL rearrangement | 3 |
| acute myeloid leukemia with mutated NPM1 | 8 |
| acute promyelocytic leukemia | 12 |
| acute promyelocytic leukemia with PML-RARA | 1 |
| adenocarcinoma | 45 |
| adenoid cystic carcinoma | 2 |
| adenosquamous lung carcinoma | 5 |
| adrenal cortical adenoma | 17 |
| adrenal neuroblastoma | 2 |
| adrenocortical carcinoma | 6 |
| adult acute monocytic leukemia | 4 |
| adult hepatocellular carcinoma | 1 |
| adult pineal parenchymal tumor | 1 |
| adult respiratory distress syndrome | 17 |
| adult T-cell leukemia/lymphoma | 1 |
| age related macular degeneration | 65 |
| allergic asthma | 70 |
| alveolar rhabdomyosarcoma | 10 |
| alveolar soft part sarcoma | 1 |
| Alzheimer's disease | 1289 |
| Alzheimer's disease 3 | 14 |
| amelanotic melanoma | 5 |
| ampulla of Vater adenocarcinoma | 2 |
| amyotrophic lateral sclerosis | 55 |
| anaplastic astrocytoma | 1 |
| anaplastic large cell lymphoma | 7 |
| anaplastic oligodendroglioma | 1 |
| anemia | 37 |
| angiosarcoma | 1 |
| ankylosing spondylitis | 64 |
| aortic atherosclerosis | 42 |
| aortic disease | 10 |
| aplastic anemia | 9 |
| arrhythmogenic right ventricular cardiomyopathy | 148 |
| arteriovenous malformation | 41 |
| arthritis | 126 |
| Askin's tumor | 1 |
| asthma | 105 |
| ataxia telangiectasia | 48 |
| atherosclerosis | 94 |
| atopic dermatitis | 67 |
| atrial fibrillation | 9 |
| atrophic gastritis | 97 |
| atypical chronic myeloid leukemia, BCR-ABL1 negative | 6 |
| atypical teratoid rhabdoid tumor | 3 |
| autism spectrum disorder | 28 |
| autoimmune disease | 23 |
| autoimmune thyroiditis | 14 |
| autosomal dominant polycystic kidney disease | 28 |
| azoospermia | 9 |
| B-cell acute lymphoblastic leukemia | 9 |
| B-cell adult acute lymphocytic leukemia | 9 |
| B-cell lymphoma | 2 |
| B-cell prolymphocytic leukemia | 1 |
| bacterial infectious disease | 117 |
| bacterial sepsis | 91 |
| Barrett's adenocarcinoma | 1 |
| Barrett's esophagus | 102 |
| basal cell carcinoma | 78 |
| basaloid squamous cell carcinoma | 1 |
| Behcet's disease | 20 |
| bile duct cancer | 10 |
| biliary tract cancer | 51 |
| biotinidase deficiency | 23 |
| bipolar disorder | 2 |
| bladder carcinoma | 23 |
| bladder squamous cell carcinoma | 1 |
| bladder urothelial carcinoma | 13 |
| bone cancer | 4 |
| bone carcinoma | 2 |
| bone disease | 2 |
| bone giant cell sarcoma | 3 |
| bone marrow cancer | 4 |
| Borst-Jadassohn intraepidermal carcinoma | 30 |
| brain cancer | 48 |
| breast adenocarcinoma | 10 |
| breast cancer | 670 |
| breast carcinoma | 245 |
| breast ductal carcinoma | 11 |
| breast fibroadenoma | 8 |
| breast lobular carcinoma | 8 |
| breast medullary carcinoma | 1 |
| breast metaplastic carcinoma | 3 |
| breast squamous cell carcinoma | 1 |
| breast tubular carcinoma | 9 |
| bronchiolo-alveolar adenocarcinoma | 5 |
| bronchitis | 8 |
| bullous pemphigoid | 40 |
| Burkitt lymphoma | 20 |
| cancer | 546 |
| cannabis abuse | 7 |
| carcinoma | 4 |
| cardiomyopathy | 26 |
| cardiovascular organ benign neoplasm | 12 |
| cardiovascular system disease | 64 |
| cecum adenocarcinoma | 7 |
| celiac disease | 5 |
| central nervous system embryonal tumor | 2 |
| cerebellum cancer | 74 |
| cerebrovascular disease | 116 |
| cervical adenocarcinoma | 9 |
| cervical cancer | 77 |
| cervical clear cell adenocarcinoma | 1 |
| cervical squamous cell carcinoma | 10 |
| cervix carcinoma | 31 |
| chickenpox | 1 |
| childhood acute megakaryoblastic leukemia | 1 |
| childhood acute myeloid leukemia | 24 |
| childhood B-cell acute lymphoblastic leukemia | 7 |
| childhood ependymoma | 13 |
| childhood T-cell acute lymphoblastic leukemia | 8 |
| cholangiocarcinoma | 8 |
| chondrosarcoma | 5 |
| choriocarcinoma | 3 |
| choroid plexus carcinoma | 1 |
| chromophobe renal cell carcinoma | 14 |
| chromosome 13q14 deletion syndrome | 3 |
| chronic eosinophilic leukemia | 1 |
| chronic granulomatous disease | 4 |
| chronic kidney disease | 195 |
| chronic leukemia | 3 |
| chronic lymphocytic leukemia | 100 |
| chronic myelogenous leukemia, BCR-ABL1 positive | 2 |
| chronic myeloid leukemia | 80 |
| chronic obstructive pulmonary disease | 127 |
| chronic rhinitis | 62 |
| clear cell renal cell carcinoma | 413 |
| clear cell sarcoma | 1 |
| Cockayne syndrome | 6 |
| colitis | 53 |
| colon adenocarcinoma | 35 |
| colon cancer | 121 |
| colon carcinoma | 26 |
| colorectal adenocarcinoma | 4 |
| colorectal adenoma | 4 |
| colorectal cancer | 716 |
| colorectal carcinoma | 9 |
| common cold | 87 |
| common variable immunodeficiency | 51 |
| congenital fibrosarcoma | 1 |
| congenital heart disease | 3 |
| congestive heart failure | 45 |
| coronary artery disease | 35 |
| COVID-19 | 1944 |
| craniopharyngioma | 1 |
| Crohn's disease | 448 |
| cystic fibrosis | 178 |
| dedifferentiated liposarcoma | 2 |
| degenerative disc disease | 14 |
| dengue disease | 27 |
| dental caries | 2 |
| depressive disorder | 12 |
| desmoplastic small round cell tumor | 1 |
| developmental and epileptic encephalopathy 54 | 18 |
| diabetes mellitus | 349 |
| Diamond-Blackfan anemia | 6 |
| differentiated thyroid gland carcinoma | 4 |
| diffuse large B-cell lymphoma | 19 |
| diffuse large B-cell lymphoma activated B-cell type | 1 |
| diffuse large B-cell lymphoma germinal center B-cell type | 2 |
| diffuse midline glioma, H3 K27M-mutant | 12 |
| dilated cardiomyopathy | 238 |
| diphtheria | 1 |
| disease by infectious agent | 1 |
| disease of cellular proliferation | 1 |
| Down syndrome | 52 |
| Duchenne muscular dystrophy | 25 |
| ductal carcinoma in situ | 17 |
| duodenum adenocarcinoma | 1 |
| dysembryoplastic neuroepithelial tumor | 3 |
| Ebola hemorrhagic fever | 24 |
| ectopic Cushing syndrome | 18 |
| Ehlers-Danlos syndrome | 1 |
| embryonal carcinoma | 5 |
| embryonal rhabdomyosarcoma | 5 |
| embryonal tumor with multilayered rosettes, C19MC-altered | 1 |
| encephalomyelitis | 65 |
| endocervical carcinoma | 8 |
| endocrine pancreas disease | 24 |
| endodermal sinus tumor | 2 |
| endometrial adenocarcinoma | 24 |
| endometrial adenosquamous carcinoma | 2 |
| endometrial cancer | 17 |
| endometrial carcinoma | 4 |
| endometriosis | 60 |
| endometriosis of ovary | 6 |
| endometriosis of uterus | 63 |
| epilepsy | 115 |
| epithelioid sarcoma | 1 |
| erythroleukemia | 7 |
| esophageal cancer | 56 |
| esophageal carcinoma | 9 |
| esophagus adenocarcinoma | 6 |
| esophagus squamous cell carcinoma | 87 |
| Ewing sarcoma | 24 |
| extrinsic allergic alveolitis | 62 |
| eye disease | 34 |
| facioscapulohumeral muscular dystrophy | 2 |
| factor VIII deficiency | 1 |
| fallopian tube carcinoma | 9 |
| fallopian tube disease | 17 |
| familial adenomatous polyposis | 2 |
| familial hyperlipidemia | 12 |
| familial medullary thyroid carcinoma | 1 |
| familial nephrotic syndrome | 14 |
| Fanconi anemia | 4 |
| Fanconi anemia complementation group C | 1 |
| Fanconi anemia complementation group G | 1 |
| Fanconi anemia complementation group L | 1 |
| fibrolamellar carcinoma | 1 |
| fibrosarcoma | 11 |
| focal epithelial hyperplasia | 17 |
| follicular adenoma | 19 |
| follicular lymphoma | 36 |
| food allergy | 53 |
| fragile X syndrome | 11 |
| frontotemporal dementia | 109 |
| frontotemporal dementia and/or amyotrophic lateral sclerosis-1 | 162 |
| frozen shoulder | 14 |
| gallbladder cancer | 11 |
| gallbladder carcinoma | 52 |
| gastric adenocarcinoma | 69 |
| gastric adenosquamous carcinoma | 1 |
| gastric neuroendocrine neoplasm | 25 |
| gastric signet ring cell adenocarcinoma | 5 |
| gastric tubular adenocarcinoma | 6 |
| gastritis | 97 |
| gastrointestinal stromal tumor | 4 |
| germ cell cancer | 1 |
| glioblastoma | 245 |
| glioblastoma mesenchymal subtype | 3 |
| glioblastoma neural subtype | 3 |
| gliomatosis cerebri | 2 |
| gliosarcoma | 2 |
| glycogen storage disease | 1 |
| glycogen storage disease II | 1 |
| granulosa cell tumor | 2 |
| hairy cell leukemia | 2 |
| head and neck cancer | 29 |
| head and neck carcinoma | 4 |
| head and neck squamous cell carcinoma | 110 |
| heart cancer | 20 |
| heart disease | 4 |
| hemophilia B | 1 |
| hepatitis | 4 |
| hepatitis B | 95 |
| hepatoblastoma | 36 |
| hepatocellular adenoma | 1 |
| hepatocellular carcinoma | 505 |
| high grade ependymoma | 37 |
| high grade glioma | 46 |
| Hodgkin's lymphoma | 8 |
| human immunodeficiency virus infectious disease | 41 |
| Huntington's disease | 41 |
| hyperglycemia | 14 |
| hyperphosphatemic familial tumoral calcinosis | 1 |
| hypertension | 182 |
| hypertrophic cardiomyopathy | 51 |
| hypopharynx cancer | 3 |
| hypoplastic left heart syndrome | 3 |
| idiopathic interstitial pneumonia | 62 |
| idiopathic pulmonary fibrosis | 157 |
| ileitis | 34 |
| immunoglobulin light chain amyloidosis | 2 |
| impotence | 31 |
| infantile myofibromatosis | 1 |
| influenza | 298 |
| interleukin-7 receptor alpha deficiency | 15 |
| interstitial lung disease | 160 |
| intrahepatic cholangiocarcinoma | 98 |
| invasive ductal carcinoma | 15 |
| invasive lobular carcinoma | 3 |
| ischemia | 29 |
| juvenile myelomonocytic leukemia | 1 |
| Kaposi's sarcoma | 2 |
| kidney cancer | 54 |
| kidney disease | 394 |
| kidney rhabdoid cancer | 1 |
| Klatskin's tumor | 1 |
| Lafora disease | 1 |
| Langerhans-cell histiocytosis | 11 |
| large cell neuroendocrine carcinoma | 4 |
| laryngeal carcinoma | 1 |
| laryngeal squamous cell carcinoma | 23 |
| leiomyosarcoma | 4 |
| leishmaniasis | 1 |
| lepromatous leprosy | 41 |
| leptomeninges sarcoma | 50 |
| leukemia | 6 |
| lichen planus | 40 |
| liver cancer | 142 |
| liver carcinoma | 35 |
| liver cirrhosis | 68 |
| liver disease | 11 |
| long COVID | 33 |
| luminal breast carcinoma A | 16 |
| lung adenocarcinoma | 339 |
| lung adenoma | 2 |
| lung benign neoplasm | 2 |
| lung cancer | 143 |
| lung carcinoma | 29 |
| lung disease | 16 |
| lung giant cell carcinoma | 3 |
| lung large cell carcinoma | 79 |
| lung mucoepidermoid carcinoma | 2 |
| lung non-small cell carcinoma | 377 |
| lung papillary adenocarcinoma | 1 |
| lung small cell carcinoma | 58 |
| lung squamous cell carcinoma | 41 |
| lupus erythematosus | 24 |
| lupus nephritis | 28 |
| lymph node carcinoma | 2 |
| lymphangioleiomyomatosis | 62 |
| lymphedema | 21 |
| lymphocytic choriomeningitis | 27 |
| lymphoid leukemia | 2 |
| lymphoma | 93 |
| lymphoplasmacytic lymphoma | 3 |
| major depressive disorder | 117 |
| malaria | 52 |
| malignant astrocytoma | 48 |
| malignant biphasic mesothelioma | 4 |
| malignant epithelial mesothelioma | 7 |
| malignant epithelioid hemangioendothelioma | 1 |
| malignant ovarian Brenner tumor | 1 |
| malignant peripheral nerve sheath tumor | 4 |
| malignant pleural mesothelioma | 3 |
| mantle cell lymphoma | 11 |
| mast-cell leukemia | 30 |
| medulloblastoma | 68 |
| melanoma | 413 |
| melanotic neuroectodermal tumor | 1 |
| meningioma | 3 |
| metabolic dysfunction-associated steatohepatitis | 32 |
| metabolic dysfunction-associated steatotic liver disease | 85 |
| microinvasive gastric cancer | 4 |
| Middle East respiratory syndrome | 2 |
| mixed cell type kidney Wilms' tumor | 2 |
| monoclonal gammopathy of uncertain significance | 27 |
| morphine dependence | 9 |
| mucinous stomach adenocarcinoma | 2 |
| multiple myeloma | 195 |
| multiple sclerosis | 447 |
| muscular dystrophy | 16 |
| myasthenia gravis | 23 |
| mycosis fungoides | 8 |
| myelodysplastic syndrome | 5 |
| myelofibrosis | 32 |
| myeloid leukemia | 6 |
| myeloid neoplasm | 9 |
| myocardial infarction | 109 |
| myoepithelial carcinoma | 3 |
| myxofibrosarcoma | 1 |
| myxoid liposarcoma | 1 |
| nasopharynx carcinoma | 91 |
| Nasu-Hakola disease | 22 |
| nephroblastoma | 12 |
| nephrotic syndrome | 24 |
| neuroblastoma | 127 |
| neuroendocrine carcinoma | 3 |
| neuroendocrine tumor | 29 |
| neurofibroma | 8 |
| neurofibromatosis | 1 |
| neurofibromatosis 1 | 3 |
| neuropathy | 36 |
| neutropenia | 26 |
| Newcastle disease | 30 |
| nonsyndromic deafness | 16 |
| NUT midline carcinoma | 1 |
| obesity | 167 |
| oligodendroglioma | 6 |
| opioid abuse | 23 |
| opisthorchiasis | 1 |
| oral squamous cell carcinoma | 4 |
| osteoarthritis | 308 |
| osteosarcoma | 83 |
| ovarian cancer | 341 |
| ovarian carcinoma | 17 |
| ovarian clear cell adenocarcinoma | 7 |
| ovarian cystadenocarcinoma | 2 |
| ovarian endometrial cancer | 4 |
| ovarian endometrioid stromal sarcoma | 1 |
| ovarian mucinous adenocarcinoma | 3 |
| ovarian mucinous cystadenocarcinoma | 2 |
| ovarian papillary neoplasm | 1 |
| ovarian serous carcinoma | 20 |
| ovarian serous cystadenocarcinoma | 6 |
| ovary leiomyosarcoma | 1 |
| ovary serous adenocarcinoma | 20 |
| pancreatic adenocarcinoma | 50 |
| pancreatic adenosquamous carcinoma | 2 |
| pancreatic cancer | 69 |
| pancreatic carcinoma | 5 |
| pancreatic ductal adenocarcinoma | 163 |
| pancreatic endocrine carcinoma | 25 |
| pancreatic somatostatinoma | 1 |
| pancreatitis | 29 |
| papillary renal cell carcinoma | 25 |
| papilloma | 9 |
| paraganglioma | 4 |
| Parkinson's disease | 7 |
| Parkinson's disease 1 | 124 |
| pemphigus | 6 |
| periodontal disease | 9 |
| periodontitis | 47 |
| peritoneal mesothelioma | 2 |
| perivascular epithelioid cell tumor | 1 |
| peroxisomal biogenesis disorder | 19 |
| pharynx squamous cell carcinoma | 2 |
| pheochromocytoma | 22 |
| pilocytic astrocytoma | 5 |
| pituitary cancer | 6 |
| plantar fascial fibromatosis | 22 |
| plasma cell leukemia | 1 |
| plasmacytoma | 4 |
| pleomorphic carcinoma | 66 |
| pleural tuberculosis | 25 |
| pleuropulmonary blastoma | 1 |
| pneumocystosis | 30 |
| pneumonia | 155 |
| pre-eclampsia | 97 |
| primary cutaneous T-cell non-Hodgkin lymphoma | 39 |
| prion disease | 72 |
| progeria | 1 |
| progressive supranuclear palsy | 25 |
| prolapse of female genital organ | 11 |
| prostate adenocarcinoma | 1 |
| prostate cancer | 238 |
| prostate carcinoma | 32 |
| prostate small cell carcinoma | 1 |
| proteinuria | 11 |
| pseudotumor cerebri | 27 |
| pseudoxanthoma elasticum | 1 |
| psoriasis | 226 |
| psoriatic arthritis | 55 |
| pulmonary emphysema | 40 |
| pulmonary fibrosis | 159 |
| pulmonary hypertension | 35 |
| pulmonary neuroendocrine tumor | 65 |
| pulmonary tuberculosis | 124 |
| rabies | 22 |
| rectosigmoid cancer | 1 |
| rectum adenocarcinoma | 8 |
| rectum cancer | 8 |
| relapsed/refractory diffuse large B-cell lymphoma | 26 |
| renal carcinoma | 4 |
| renal cell carcinoma | 130 |
| renal fibrosis | 302 |
| renal Wilms' tumor | 4 |
| respiratory allergy | 47 |
| respiratory system disease | 58 |
| retinoblastoma | 14 |
| Rett syndrome | 1 |
| rhabdomyosarcoma | 10 |
| rheumatoid arthritis | 378 |
| Richter's syndrome | 22 |
| salivary gland carcinoma | 3 |
| salmonellosis | 41 |
| sarcoidosis | 23 |
| sarcoma | 31 |
| sarcomatoid mesothelioma | 4 |
| schizophrenia | 17 |
| seminoma | 2 |
| severe acute respiratory syndrome | 21 |
| Sezary's disease | 2 |
| sickle cell anemia | 2 |
| Sjogren's syndrome | 194 |
| skin benign neoplasm | 4 |
| skin cancer | 20 |
| skin disease | 36 |
| skin melanoma | 43 |
| skin papilloma | 12 |
| skin squamous cell carcinoma | 47 |
| skull base chordoma | 23 |
| sleeping sickness | 25 |
| small intestine neuroendocrine neoplasm | 25 |
| smoldering myeloma | 24 |
| spina bifida | 13 |
| spinal cord primitive neuroectodermal neoplasm | 3 |
| spinal muscular atrophy | 9 |
| spindle cell rhabdomyosarcoma | 1 |
| spindle cell sarcoma | 3 |
| spinocerebellar ataxia type 1 | 83 |
| spondylocostal dysostosis 3 | 1 |
| squamous cell carcinoma | 33 |
| squamous cell papilloma | 1 |
| STING-associated vasculopathy with onset in infancy | 58 |
| stomach cancer | 306 |
| stomach carcinoma | 8 |
| stomach disease | 97 |
| substance dependence | 70 |
| supratentorial cancer | 3 |
| syndrome | 2 |
| synovial sarcoma | 13 |
| systemic lupus erythematosus | 178 |
| systemic scleroderma | 81 |
| systolic heart failure | 2 |
| T-cell acute lymphoblastic leukemia | 11 |
| T-cell adult acute lymphocytic leukemia | 4 |
| T-cell childhood lymphoblastic lymphoma | 1 |
| T-cell large granular lymphocyte leukemia | 49 |
| T-cell prolymphocytic leukemia | 2 |
| tauopathy | 37 |
| teratocarcinoma | 1 |
| teratoma | 3 |
| testicular germ cell cancer | 4 |
| testis seminoma | 2 |
| thoracic aortic aneurysm | 8 |
| thrombocytopenia | 47 |
| thrombocytopenia due to platelet alloimmunization | 30 |
| thymic carcinoma | 1 |
| thymoma | 6 |
| thyroid cancer | 17 |
| thyroid gland anaplastic carcinoma | 42 |
| thyroid gland carcinoma | 24 |
| thyroid gland follicular carcinoma | 13 |
| thyroid gland papillary carcinoma | 49 |
| thyroid sarcoma | 1 |
| tongue squamous cell carcinoma | 15 |
| toxic encephalopathy | 1 |
| transient cerebral ischemia | 21 |
| transitional cell carcinoma | 8 |
| traumatic brain injury | 22 |
| trichothiodystrophy | 2 |
| triple-receptor negative breast cancer | 147 |
| trypanosomiasis | 46 |
| tuberculosis | 113 |
| type 1 diabetes mellitus | 169 |
| type 2 diabetes mellitus | 155 |
| ulcerative colitis | 260 |
| uremia | 22 |
| urinary bladder cancer | 22 |
| uterine cancer | 10 |
| uterine carcinosarcoma | 5 |
| uterine corpus endometrial carcinoma | 18 |
| uterine corpus leiomyomatosis | 1 |
| uterine corpus sarcoma | 1 |
| uterine fibroid | 69 |
| uveal melanoma | 40 |
| vaccinia | 3 |
| vestibular schwannomatosis | 12 |
| viral encephalitis | 27 |
| viral infectious disease | 158 |
| vulvar leiomyosarcoma | 1 |
| Western equine encephalitis | 6 |
| xeroderma pigmentosum | 2 |
| yellow fever | 3 |
| Zellweger syndrome | 19 |
| Anatomical structure | Marker gene sets |
|---|---|
| 2 cell stage | 2 |
| 2-cell stage embryo | 3 |
| 4 cell stage | 2 |
| 4-cell stage embryo | 1 |
| 8 cell stage | 2 |
| 8-cell stage embryo | 2 |
| abdominal aorta artery | 17 |
| abdominal segment of trunk | 9 |
| abdominal wall | 13 |
| accessory cuneate nucleus | 32 |
| adenohypophyseal placode | 8 |
| adenohypophysis | 62 |
| adipose tissue | 138 |
| adrenal cortex | 16 |
| adrenal gland | 239 |
| adrenal gland capsule | 1 |
| adrenal medulla | 5 |
| adventitia | 7 |
| airway submucosal gland | 3 |
| alimentary part of gastrointestinal system | 30 |
| allantois | 10 |
| allocortex | 21 |
| alveolar system | 368 |
| alveolus of lung | 34 |
| Ammon's horn | 148 |
| amnion | 6 |
| amnioserosa | 10 |
| amniotic ectoderm | 2 |
| amniotic fluid | 4 |
| amygdala | 330 |
| amygdalohippocampal area | 51 |
| anal canal | 8 |
| anal region | 7 |
| anatomical conduit | 1 |
| anatomical line between outer ears | 1 |
| anatomical projection | 1 |
| angular gyrus | 154 |
| ankle joint | 6 |
| anlage | 5 |
| annulus fibrosus | 10 |
| antenna | 27 |
| anterior amygdaloid area | 44 |
| anterior chamber of eyeball | 19 |
| anterior cingulate cortex | 219 |
| anterior cingulate gyrus | 3 |
| anterior definitive endoderm | 1 |
| anterior hypothalamic region | 4 |
| anterior neural keel | 1 |
| anterior neural rod | 1 |
| anterior nuclear group | 6 |
| anterior nucleus of hypothalamus | 116 |
| anterior pretectal nucleus | 20 |
| anterior region of body | 1 |
| anterior segment of eyeball | 47 |
| anterior segment of paracentral lobule | 1 |
| anterior ventrolateral plate | 1 |
| anterior visceral endoderm | 4 |
| anterodorsal nucleus of thalamus | 5 |
| anteromedial nucleus of thalamus | 1 |
| anteroventral nucleus of thalamus | 5 |
| anteroventral periventricular nucleus | 32 |
| aorta | 237 |
| aorta endothelium | 28 |
| aorta smooth muscle tissue | 7 |
| aortic valve | 12 |
| apical ectodermal ridge | 2 |
| arachnoid barrier layer | 21 |
| arachnoid mater | 7 |
| arch of centrum of vertebra | 1 |
| archicortex | 6 |
| arcuate nucleus of hypothalamus | 186 |
| arcuate nucleus of medulla | 2 |
| area postrema | 8 |
| area X of ventral lateral nucleus | 2 |
| arteriole | 11 |
| artery | 21 |
| artery smooth muscle tissue | 5 |
| arthropod fat body | 36 |
| arthropod optic lobe | 18 |
| articular cartilage of joint | 34 |
| ascending aorta | 18 |
| ascending colon | 11 |
| ascending limb of loop of Henle | 38 |
| ascitic fluid | 115 |
| atretic follicle of ovary | 1 |
| atrioventricular canal | 15 |
| atrioventricular region | 5 |
| auditory cortex | 158 |
| autonomic nervous system | 2 |
| axial mesoderm | 3 |
| Barrington's nucleus | 13 |
| basal amygdaloid nucleus | 38 |
| basal forebrain | 19 |
| basal ganglion | 2 |
| basal nucleus of telencephalon | 70 |
| basilar membrane of cochlea | 1 |
| basilic vein | 18 |
| bed nucleus of stria terminalis | 358 |
| bed nucleus of the accessory olfactory tract | 1 |
| bile | 18 |
| bile duct | 81 |
| biliary tree | 51 |
| bladder organ | 113 |
| blastocyst | 50 |
| blastoderm | 7 |
| blastodisc | 2 |
| blastula | 4 |
| blood | 4822 |
| blood brain barrier | 20 |
| blood clot | 10 |
| blood island | 10 |
| blood nerve barrier | 1 |
| blood plasma | 13 |
| blood serum | 46 |
| blood vasculature | 1 |
| blood vessel | 77 |
| blood vessel endothelium | 65 |
| blood vessel smooth muscle | 12 |
| blood-cerebrospinal fluid barrier | 55 |
| body of caudate nucleus | 5 |
| body of stomach | 92 |
| body proper | 62 |
| body wall | 13 |
| bone element | 54 |
| bone marrow | 2807 |
| bone tissue | 28 |
| bony vertebral centrum | 1 |
| brachial lymph node | 11 |
| brain | 20828 |
| brain blood vessel | 4 |
| brain endothelium | 30 |
| brain meninx | 1 |
| brainstem | 24 |
| brainstem nucleus | 1 |
| branchiomeric muscle | 2 |
| breast | 1240 |
| breast epithelium | 26 |
| Brodmann (1909) area 18 | 4 |
| bronchus | 219 |
| bronchus submucosal gland | 2 |
| brown adipose tissue | 121 |
| buccal mucosa | 8 |
| bulb of hair follicle | 2 |
| bundle of His | 6 |
| CA1 field of hippocampus | 106 |
| CA2 field of hippocampus | 27 |
| CA3 field of hippocampus | 71 |
| CA4 field of hippocampus | 1 |
| caecum | 97 |
| canal of Schlemm | 5 |
| capillary | 1 |
| capillary blood | 11 |
| capillary layer of choroid | 1 |
| capsule of liver | 6 |
| capsule of thymus | 1 |
| caput epididymis | 20 |
| cardia of stomach | 99 |
| cardiac atrium | 19 |
| cardiac mesenchyme | 2 |
| cardiac muscle tissue | 4 |
| cardiac neural crest | 4 |
| cardiac valve | 16 |
| cardiac ventricle | 30 |
| cardiogenic splanchnic mesoderm | 4 |
| cardiopharyngeal field | 14 |
| cardiovascular system | 2 |
| carotid artery segment | 61 |
| cartilage element | 17 |
| cartilage tissue | 1 |
| cauda epididymis | 2 |
| caudal fin | 14 |
| caudal ganglionic eminence | 48 |
| caudal intralaminar nuclear group | 95 |
| caudal part of spinal trigeminal nucleus | 1 |
| caudal pontine reticular nucleus | 1 |
| caudate nucleus | 7 |
| caudate-putamen | 39 |
| cecum mucosa | 24 |
| central amygdaloid nucleus | 106 |
| central canal of spinal cord | 17 |
| central gray substance of midbrain | 610 |
| central gray substance of pons | 209 |
| central lateral nucleus | 21 |
| central medial nucleus | 21 |
| central nervous system | 2564 |
| central vein of liver | 8 |
| centromedian nucleus of thalamus | 2 |
| cephalic vein | 18 |
| cephalopod optic lobe | 1 |
| cerebellar cortex | 106 |
| cerebellar nuclear complex | 16 |
| cerebellar vermis | 54 |
| cerebellum | 1183 |
| cerebellum intermediate zone | 56 |
| cerebral cortex | 1704 |
| cerebral cortex subventricular zone | 80 |
| cerebral cortex ventricular layer | 63 |
| cerebral hemisphere | 122 |
| cerebral nuclei | 412 |
| cerebrospinal fluid | 259 |
| cervical loop | 1 |
| cervical lymph node | 13 |
| cervical spinal cord | 63 |
| cervix epithelium | 2 |
| chordate pharyngeal muscle | 4 |
| chordotonal organ | 7 |
| chorioallantoic membrane | 1 |
| chorion membrane | 1 |
| chorionic villus | 24 |
| choroid plexus | 177 |
| choroid plexus epithelium | 1 |
| ciliary body | 56 |
| ciliary epithelium | 13 |
| ciliary marginal zone | 1 |
| ciliary muscle | 4 |
| ciliated columnar oviduct epithelium | 7 |
| cingulate cortex | 1 |
| circular muscle layer of muscular coat | 4 |
| circulatory system dorsal vessel | 2 |
| claustrum cartilage | 2 |
| claustrum of brain | 21 |
| cloaca | 2 |
| cochlea | 320 |
| cochlear canal | 5 |
| coelomic epithelium | 27 |
| collecting duct of renal tubule | 180 |
| collection of basal ganglia | 4 |
| colon | 1567 |
| colon endothelium | 12 |
| colonic epithelium | 33 |
| colonic mucosa | 106 |
| colorectum | 62 |
| columnar epithelium | 1 |
| comma-shaped body | 6 |
| common bile duct | 15 |
| common carotid artery plus branches | 10 |
| compound eye | 35 |
| conducting system of heart | 4 |
| conjunctiva | 20 |
| connective tissue | 53 |
| cornea | 36 |
| corneal endothelium | 6 |
| corneal epithelium | 26 |
| corneo-scleral junction | 21 |
| coronal suture | 28 |
| coronary artery | 102 |
| coronary vessel | 2 |
| corpus | 3 |
| corpus albicans | 2 |
| corpus allatum | 1 |
| corpus callosum | 42 |
| corpus cavernosum | 33 |
| corpus luteum | 11 |
| corpuscles of Stannius | 1 |
| cortex | 53 |
| cortex of cerebral lobe | 73 |
| cortex of hair | 3 |
| cortex of kidney | 67 |
| cortex of thymus | 29 |
| cortical amygdaloid nucleus | 120 |
| cortical collecting duct | 28 |
| cortical layer I | 2 |
| cortical layer II | 9 |
| cortical layer II/III | 4 |
| cortical layer III | 3 |
| cortical layer IV | 9 |
| cortical layer V | 9 |
| cortical layer V/VI | 4 |
| cortical layer VI | 17 |
| cortical plate | 61 |
| cortical subplate | 17 |
| corticobulbar and corticospinal tracts | 6 |
| cranial ganglion | 9 |
| cranial muscle | 3 |
| cranial nerve | 7 |
| cranial neural crest | 30 |
| cranial placode | 10 |
| cranial skeletal system | 22 |
| cranial suture | 8 |
| craniocervical region | 55 |
| cranium | 21 |
| crista ampullaris | 3 |
| crop | 1 |
| crypt of Lieberkuhn | 84 |
| crypt of Lieberkuhn of colon | 6 |
| crypt of Lieberkuhn of large intestine | 2 |
| crypt of Lieberkuhn of small intestine | 2 |
| cuneate nucleus | 34 |
| cuneiform nucleus | 111 |
| cuticle | 5 |
| cuticle of hair | 3 |
| cytotrophoblast | 18 |
| decidua | 131 |
| decidua basalis | 34 |
| definitive endoderm | 14 |
| dental epithelium | 5 |
| dental plaque | 2 |
| dental pulp | 4 |
| dentate gyrus of hippocampal formation | 95 |
| dentate nucleus | 2 |
| dentition | 12 |
| dermal bone | 4 |
| dermal papilla | 15 |
| dermal skeleton | 1 |
| dermis | 50 |
| dermomyotome | 4 |
| descending limb of loop of Henle | 30 |
| descending thin limb | 46 |
| developing neuroepithelium | 6 |
| diaphragm | 20 |
| diastema | 1 |
| diencephalon | 70 |
| diffuse reticular nucleus | 12 |
| digestive system | 36 |
| digestive tract | 13 |
| digestive tract epithelium | 8 |
| digit | 62 |
| dilatator pupillae | 1 |
| distal convoluted tubule | 142 |
| distal early tubule | 1 |
| distal late tubule | 1 |
| distal straight tubule postmacula segment | 23 |
| distal tubule | 31 |
| dorsal cochlear nucleus | 23 |
| dorsal funiculus of spinal cord | 1 |
| dorsal head of rib | 1 |
| dorsal horn of spinal cord | 48 |
| dorsal lateral geniculate nucleus | 31 |
| dorsal longitudinal anastomotic vessel | 1 |
| dorsal marginal zone | 1 |
| dorsal motor nucleus of vagus nerve | 10 |
| dorsal ocellus | 1 |
| dorsal plus ventral thalamus | 175 |
| dorsal premammillary nucleus | 18 |
| dorsal raphe nucleus | 75 |
| dorsal root ganglion | 195 |
| dorsal tegmental nucleus | 45 |
| dorsal trunk | 14 |
| dorsal vessel heart | 4 |
| dorsolateral prefrontal cortex | 1025 |
| dorsomedial nucleus of hypothalamus | 168 |
| duct | 10 |
| duct of salivary gland | 13 |
| duct of sebaceous gland | 2 |
| duodenal epithelium | 2 |
| duodenum | 304 |
| dura mater | 122 |
| ear | 7 |
| ear vesicle | 31 |
| early distal convoluted tubule | 1 |
| early embryo | 4 |
| early pharyngeal endoderm | 3 |
| early proximal tubule | 2 |
| eccrine sweat gland | 7 |
| ectoderm | 128 |
| ectoplacental cone | 2 |
| efferent duct | 12 |
| ejaculatory duct | 1 |
| embryo | 1655 |
| embryo stage | 232 |
| embryoid body | 92 |
| embryonic facial prominence | 10 |
| enamel knot | 2 |
| endocardium | 72 |
| endocervix | 3 |
| endochondral bone | 8 |
| endocrine pancreas | 3 |
| endocrine system | 41 |
| endoderm | 109 |
| endoderm of hindgut | 1 |
| endoderm of midgut | 1 |
| endodermal part of digestive tract | 2 |
| endolymphatic sac | 6 |
| endometrial blood vessel | 4 |
| endometrial gland | 3 |
| endometrial stroma | 20 |
| endometrium | 291 |
| endometrium epithelium | 4 |
| endometrium luminal epithelium | 4 |
| endoneurium | 2 |
| endopeduncular nucleus | 1 |
| endopiriform nucleus | 10 |
| endothelium | 75 |
| endothelium of artery | 242 |
| endothelium of capillary | 281 |
| endothelium of main bronchus | 1 |
| endothelium of peritubular capillary | 7 |
| endothelium of vein | 1 |
| enteric nervous system | 138 |
| enthesis | 7 |
| entire embryonic mesenchyme | 25 |
| entorhinal cortex | 147 |
| enveloping layer of ectoderm | 13 |
| epiblast (generic) | 55 |
| epibranchial placode | 6 |
| epicardium | 60 |
| epicardium of ventricle | 2 |
| epidermis suprabasal layer | 10 |
| epididymis | 69 |
| epididymis epithelium | 2 |
| epineurium | 1 |
| epiphysis | 4 |
| epithalamus | 10 |
| epithelial bud | 3 |
| epithelial scleral papilla layer | 37 |
| epithelium | 959 |
| epithelium of appendix | 1 |
| epithelium of biliary system | 1 |
| epithelium of bronchus | 48 |
| epithelium of conjunctiva | 10 |
| epithelium of crypt of Lieberkuhn of small intestine | 19 |
| epithelium of esophagus | 7 |
| epithelium of female gonad | 1 |
| epithelium of female urethra | 1 |
| epithelium of gall bladder | 3 |
| epithelium of gonad | 1 |
| epithelium of intestinal villus | 10 |
| epithelium of large intestine | 18 |
| epithelium of lens | 5 |
| epithelium of lobular bronchiole | 4 |
| epithelium of main bronchus | 9 |
| epithelium of male gonad | 4 |
| epithelium of mammary gland | 39 |
| epithelium of otic placode | 3 |
| epithelium of rectum | 2 |
| epithelium of respiratory bronchiole | 4 |
| epithelium of small intestine | 65 |
| epithelium of stomach | 5 |
| epithelium of tongue | 1 |
| epithelium of trachea | 22 |
| epithelium of urethra | 1 |
| epithelium of vagina | 1 |
| esophagogastric junction | 89 |
| esophagus | 391 |
| esophagus mucosa | 44 |
| esophagus muscularis mucosa | 41 |
| exocrine gland | 12 |
| exocrine pancreas | 2 |
| exocrine pancreas epithelium | 3 |
| extensor digitorum longus | 8 |
| external ectoderm | 5 |
| external female genitalia | 1 |
| external genitalia | 12 |
| external soft tissue zone | 9 |
| extraembryonic ectoderm | 8 |
| extraembryonic endoderm | 17 |
| extraembryonic mesoderm | 7 |
| extraembryonic structure | 3 |
| extraembryonic tissue | 23 |
| extraglomerular mesangium | 1 |
| extravillous trophoblast | 38 |
| eye | 639 |
| eye primordium | 3 |
| eye trabecular meshwork | 34 |
| eyeball of camera-type eye | 6 |
| eyelash | 6 |
| face | 11 |
| facial motor nucleus | 1 |
| facial skeleton | 3 |
| fallopian tube | 131 |
| fascia | 23 |
| fasciola cinerea | 6 |
| fast muscle tissue | 4 |
| fastigial nucleus | 1 |
| fat pad | 17 |
| feces | 8 |
| female organism | 1 |
| female preputial gland | 1 |
| female reproductive system | 6 |
| femur | 23 |
| fenestrated capillary | 4 |
| fifth lumbar dorsal root ganglion | 68 |
| fin | 27 |
| first pancreatic bud | 8 |
| flocculonodular lobe | 1 |
| floor plate | 30 |
| floor plate of midbrain | 1 |
| forebrain | 294 |
| forebrain meninges | 2 |
| foregut | 35 |
| forelimb | 38 |
| forelimb bud | 37 |
| fourth lumbar dorsal root ganglion | 68 |
| fourth ventricle | 2 |
| fovea centralis | 126 |
| foveola of retina | 41 |
| frontal cortex | 664 |
| frontal lobe | 25 |
| frontal operculum | 1 |
| frontal suture | 13 |
| fronto-orbital gyrus | 4 |
| fundic gastric gland | 75 |
| fundus of stomach | 1 |
| fundus striati | 15 |
| fusiform gyrus | 2 |
| future brain | 2 |
| future meninx | 1 |
| gallbladder | 51 |
| ganglion | 1 |
| ganglionic eminence | 122 |
| gastric gland | 6 |
| gastric pit | 34 |
| gastrocnemius | 19 |
| gastroesophageal sphincter | 71 |
| gastrointestinal system mucosa | 19 |
| gastrula | 12 |
| gastrula stage | 3 |
| geniculate ganglion | 1 |
| geniculate placode | 1 |
| genitourinary system | 2 |
| genu of corpus callosum | 1 |
| germ layer | 2 |
| germinal center | 6 |
| germinal epithelium of ovary | 8 |
| gigantocellular nucleus | 35 |
| gill | 34 |
| gill lamella | 1 |
| gingiva | 37 |
| gingival epithelium | 1 |
| gland | 4 |
| glandular acinus | 76 |
| glandular epithelium | 30 |
| globus pallidus | 19 |
| glomerular capillary | 8 |
| glomerular capillary endothelium | 10 |
| glomerular endothelium | 2 |
| glomerular epithelium | 6 |
| glomerular mesangium | 1 |
| glomerular parietal epithelium | 39 |
| glomerular visceral epithelium | 120 |
| gonad | 129 |
| gonad germinal epithelium | 2 |
| gonad primordium | 1 |
| gonadal fat pad | 5 |
| gracile nucleus | 1 |
| granular layer of cerebellar cortex | 2 |
| gray matter | 8 |
| gray matter of hindbrain | 4 |
| gray matter of spinal cord | 2 |
| great saphenous vein | 19 |
| gustatory system | 3 |
| gyrus rectus | 1 |
| habenula | 63 |
| habenular nucleus | 5 |
| hair follicle | 82 |
| hair follicle bulge | 19 |
| hair follicle isthmus | 1 |
| hair follicle matrix region | 3 |
| hair follicle placode | 14 |
| hair inner root sheath | 16 |
| hair medulla | 5 |
| hair of scalp | 1 |
| hair outer root sheath | 7 |
| hair root sheath | 2 |
| hair shaft | 9 |
| haltere | 7 |
| hard palate | 28 |
| hatching gland | 13 |
| head | 124 |
| head bone | 1 |
| head ectomesenchyme | 4 |
| head kidney | 108 |
| head mesenchyme | 6 |
| head mesenchyme from mesoderm | 3 |
| head sensory canal system | 1 |
| heart | 1922 |
| heart left ventricle | 202 |
| heart primordium | 10 |
| heart right ventricle | 43 |
| heart tube | 1 |
| hematopoietic system | 3 |
| hematopoietic tissue | 20 |
| hemolymph | 14 |
| hepatic acinus zone 1 | 1 |
| hepatic acinus zone 2 | 1 |
| hepatic acinus zone 3 | 1 |
| hepatic duct | 2 |
| hepatic portal system | 1 |
| hepatic portal vein | 3 |
| hepatic sinusoid | 29 |
| hepatopancreas | 1 |
| high endothelial venule | 14 |
| hindbrain | 309 |
| hindgut | 22 |
| hindlimb | 28 |
| hindlimb muscle | 52 |
| hip | 24 |
| hippocampal field | 6 |
| hippocampal formation | 1104 |
| hippocampus pyramidal layer | 39 |
| hypaxial myotome region | 3 |
| hypochord | 1 |
| hypodermis | 61 |
| hypoglossal nucleus | 1 |
| hypopharynx | 1 |
| hypothalamus | 1945 |
| ileum | 628 |
| immune system | 545 |
| incisor tooth | 14 |
| induseum griseum | 6 |
| inferior cervical ganglion | 8 |
| inferior colliculus | 100 |
| inferior olivary complex | 4 |
| inferior olivary nucleus | 6 |
| inferior parietal cortex | 1 |
| inferior temporal gyrus | 1 |
| inferior vestibular nucleus | 82 |
| infundibulum of hair follicle | 9 |
| inguinal lymph node | 27 |
| inner cell mass | 8 |
| inner cell mass derived hypoblast | 11 |
| inner dental epithelium | 5 |
| inner medullary collecting duct | 15 |
| inner nuclear layer of retina | 1 |
| inner plexiform layer of retina | 1 |
| inner spiral sulcus | 3 |
| insect adult cerebral ganglion | 6 |
| insect adult prothoracic segment | 1 |
| insect cardiogenic mesoderm | 7 |
| insect dorsal appendage | 1 |
| insect dorsal epidermis primordium | 1 |
| insect embryonic brain | 2 |
| insect embryonic/larval lymph gland | 23 |
| insect epithelial furrow | 1 |
| insect eye-antennal disc | 13 |
| insect mesothoracic tergum | 1 |
| insect proboscis | 12 |
| insect ring gland | 3 |
| insect trunk mesoderm | 3 |
| insect ventral epidermis primordium | 1 |
| insect visceral mesoderm | 2 |
| insect wing disc | 25 |
| insular cortex | 4 |
| integument | 56 |
| interanterodorsal nucleus of the thalamus | 21 |
| intercalated amygdaloid nuclei | 18 |
| intercalated duct | 1 |
| intercalated duct of salivary gland | 2 |
| intergeniculate leaflet of the lateral geniculate complex | 1 |
| intermediate mesoderm | 13 |
| intermediate oculomotor nucleus | 1 |
| intermediate reticular nucleus | 17 |
| internal ear | 67 |
| interpeduncular nucleus | 59 |
| interphalangeal joint | 33 |
| interpolar part of spinal trigeminal nucleus | 1 |
| interscapular fat pad | 27 |
| interstitial nucleus of Cajal | 5 |
| interstitial tissue | 7 |
| interventricular septum | 1 |
| intervertebral disk | 22 |
| intestinal bulb | 14 |
| intestinal epithelium | 100 |
| intestinal mucosa | 25 |
| intestinal villus | 10 |
| intestine | 941 |
| intrahepatic bile duct epithelium | 3 |
| intraparietal sulcus | 1 |
| iris | 29 |
| iris epithelium | 7 |
| islet of Langerhans | 309 |
| jaw mesenchyme | 1 |
| jaw region | 1 |
| jaw skeleton | 3 |
| jejunal epithelium | 50 |
| jejunum | 229 |
| juxtaglomerular apparatus | 17 |
| juxtamedullary cortex | 1 |
| kidney | 2979 |
| kidney arterial blood vessel | 3 |
| kidney capillary | 3 |
| kidney epithelium | 6 |
| kidney interstitium | 65 |
| kidney pelvis urothelium | 3 |
| kidney vasculature | 1 |
| lacrimal drainage system | 5 |
| lacrimal gland | 74 |
| lacrimal sac | 1 |
| lamina of spiral limbus | 11 |
| lamina propria | 38 |
| lamina propria of mucosa of colon | 2 |
| lamina propria of small intestine | 82 |
| large intestine | 87 |
| larva | 59 |
| laryngeal vocal fold | 18 |
| late adult stage | 2 |
| late distal convoluted tubule | 1 |
| late embryonic stage | 140 |
| lateral amygdaloid nucleus | 39 |
| lateral dorsal nucleus | 2 |
| lateral floor plate | 4 |
| lateral funiculus of spinal cord | 1 |
| lateral ganglionic eminence | 29 |
| lateral geniculate body | 5 |
| lateral globus pallidus | 70 |
| lateral habenular nucleus | 29 |
| lateral hypothalamic area | 327 |
| lateral line | 7 |
| lateral line primordium | 7 |
| lateral line system | 15 |
| lateral nasal process mesenchyme | 2 |
| lateral nuclear group of thalamus | 1 |
| lateral parabrachial nucleus | 1 |
| lateral plate | 5 |
| lateral plate mesoderm | 66 |
| lateral posterior nucleus of thalamus | 1 |
| lateral preoptic nucleus | 138 |
| lateral reticular nucleus | 5 |
| lateral septal complex | 191 |
| lateral vestibular nucleus | 1 |
| laterodorsal tegmental nucleus | 164 |
| layer of dentate gyrus | 8 |
| layer of developing cerebral cortex | 9 |
| layer of synovial tissue | 343 |
| left cardiac atrium | 11 |
| left ovary | 1 |
| left ventricle myocardium | 2 |
| leg | 10 |
| lens anterior epithelium | 2 |
| lens equatorial epithelium | 2 |
| lens fiber | 3 |
| lens of camera-type eye | 6 |
| lens placode | 8 |
| lens vesicle | 1 |
| leptomeninx | 83 |
| Leydig cell region of testis | 98 |
| ligament of temporomandibular joint | 23 |
| limb | 112 |
| limb bud | 16 |
| limb mesenchyme | 2 |
| limb muscle | 22 |
| limiting membrane of retina | 1 |
| line of Schwalbe | 1 |
| lingual gyrus | 1 |
| liver | 3281 |
| liver bud | 10 |
| liver lobule centrilobular region | 20 |
| liver lobule midzonal region | 16 |
| liver lobule periportal region | 11 |
| liver primordium | 1 |
| lobe of prostate | 19 |
| lobular bronchiole | 2 |
| locus ceruleus | 2 |
| long bone | 24 |
| longitudinal muscle layer of muscular coat | 1 |
| loop of Henle | 73 |
| loop of Henle ascending limb thin segment | 39 |
| lower central secondary incisor tooth | 1 |
| lower digestive tract | 82 |
| lower first secondary molar tooth | 1 |
| lower first secondary premolar tooth | 2 |
| lower lateral secondary incisor tooth | 1 |
| lower respiratory tract | 30 |
| lower rhombic lip | 8 |
| lower second secondary molar tooth | 3 |
| lower second secondary premolar tooth | 2 |
| lower secondary canine tooth | 2 |
| lower third secondary molar tooth | 1 |
| lumbar dorsal root ganglion | 11 |
| lumbar spinal cord | 70 |
| luminal layer of epithelium | 1 |
| lung | 4882 |
| lung bud | 2 |
| lung epithelium | 46 |
| lung mesenchyme | 10 |
| lung parenchyma | 15 |
| lung primordium | 1 |
| lung vasculature | 85 |
| lymph | 10 |
| lymph node | 742 |
| lymph node endothelium | 3 |
| lymph node follicle marginal zone | 33 |
| lymph node germinal center | 1 |
| lymph node germinal center dark zone | 24 |
| lymph node germinal center light zone | 18 |
| lymph node medullary sinus | 1 |
| lymphatic vessel | 331 |
| lymphatic vessel endothelium | 2 |
| lymphoid tissue | 8 |
| macula | 2 |
| macula densa | 21 |
| magnocellular nucleus of stria terminalis | 162 |
| magnocellular reticular nucleus | 7 |
| male accessory sex gland | 17 |
| male genital duct | 8 |
| male organism | 12 |
| male preputial gland | 1 |
| male reproductive gland | 14 |
| male reproductive system | 71 |
| Malpighian tubule | 47 |
| mammalian vulva | 1 |
| mammary duct terminal end bud | 4 |
| mammary gland | 281 |
| mammary gland alveolus | 18 |
| mammillary body | 30 |
| mandible | 8 |
| mantle | 4 |
| marginal zone of spleen | 4 |
| mature ovarian follicle | 3 |
| maxillary process mesenchyme | 1 |
| maxillary prominence | 11 |
| medial amygdaloid nucleus | 293 |
| medial dorsal nucleus of thalamus | 23 |
| medial entorhinal cortex | 3 |
| medial ganglionic eminence | 61 |
| medial geniculate body | 14 |
| medial gland of ocular region | 4 |
| medial globus pallidus | 41 |
| medial habenular nucleus | 41 |
| medial mammillary nucleus | 18 |
| medial parabrachial nucleus | 1 |
| medial part of basal amygdaloid nucleus | 61 |
| medial preoptic nucleus | 144 |
| medial preoptic region | 154 |
| medial septal nucleus | 21 |
| medial subnucleus of solitary tract | 276 |
| medial superior olivary nucleus | 1 |
| medial vestibular nucleus | 128 |
| median eminence of neurohypophysis | 82 |
| median fin fold | 1 |
| median preoptic nucleus | 32 |
| median raphe nucleus | 96 |
| mediastinal lymph node | 166 |
| medulla oblongata | 214 |
| medulla of lymph node | 4 |
| medulla of thymus | 76 |
| medullary reticular formation | 201 |
| meningeal cluster | 5 |
| meninx | 50 |
| meninx of spinal cord | 14 |
| mesangium | 2 |
| mesencephalic nucleus of trigeminal nerve | 3 |
| mesenchyme | 505 |
| mesenchyme of fronto-nasal process | 7 |
| mesenchyme pectoral fin | 1 |
| mesenteric fat pad | 56 |
| mesenteric lymph node | 401 |
| mesoderm | 350 |
| mesoderm-derived structure | 3 |
| mesonephric duct | 4 |
| mesonephric mesenchyme | 6 |
| mesonephric tubule | 14 |
| mesonephros | 13 |
| mesothelium | 7 |
| mesothelium of pleural cavity | 2 |
| metanephric cap | 8 |
| metanephric mesenchyme | 5 |
| metanephros | 6 |
| microvascular endothelium | 23 |
| midbrain | 775 |
| midbrain basal plate | 1 |
| midbrain neural rod | 4 |
| midbrain raphe nuclei | 52 |
| midbrain tectum | 1 |
| midbrain-hindbrain boundary | 18 |
| middle frontal gyrus | 2 |
| middle gray layer of superior colliculus | 60 |
| middle temporal gyrus | 150 |
| middle white layer of superior colliculus | 23 |
| midgut | 46 |
| midline column | 2 |
| midline nuclear group | 1 |
| minor salivary gland | 20 |
| molar tooth | 1 |
| molecular layer of cerebellar cortex | 17 |
| morula | 1 |
| motor nucleus of trigeminal nerve | 1 |
| mouth mucosa | 2 |
| mucosa | 12 |
| mucosa of oral region | 1 |
| mucosa of pyloric antrum | 23 |
| mucosa of rectum | 2 |
| mucosa of stomach | 16 |
| mucous acinus | 1 |
| mucous gland of lung | 2 |
| Mullerian duct | 4 |
| muscle head | 1 |
| muscle layer of colon | 22 |
| muscle layer of intestine | 1 |
| muscle layer of rectum | 1 |
| muscle organ | 12 |
| muscle structure | 245 |
| muscle tissue | 16 |
| muscular coat | 2 |
| muscularis mucosa | 2 |
| musculature | 61 |
| musculature of body | 1 |
| musculature of body wall | 84 |
| musculoskeletal system | 2 |
| mushroom body | 15 |
| myelencephalon | 410 |
| myenteric nerve plexus | 28 |
| myocardium | 21 |
| myocardium trabecular layer | 2 |
| myoepithelium | 1 |
| myometrium | 133 |
| myotome | 6 |
| nail | 22 |
| nasal artery | 6 |
| nasal cavity | 135 |
| nasal cavity epithelium | 111 |
| nasal cavity mucosa | 103 |
| nasolacrimal groove | 2 |
| nasopharynx | 330 |
| neck | 19 |
| nematode pharynx | 8 |
| neocortex | 451 |
| neonate stage | 131 |
| nephric duct | 3 |
| nephron | 51 |
| nephron epithelium | 3 |
| nephron progenitor | 17 |
| nephron tubule | 10 |
| nephron tubule epithelium | 1 |
| nerve | 4 |
| nerve fiber layer of retina | 1 |
| nervous system | 415 |
| neural crest | 79 |
| neural crest-derived structure | 2 |
| neural keel | 1 |
| neural plate | 9 |
| neural rod | 1 |
| neural system | 1 |
| neural tube | 41 |
| neural tube basal plate | 1 |
| neurectoderm | 7 |
| neurohypophysis | 15 |
| neuromast | 25 |
| neuron projection bundle connecting eye with brain | 37 |
| neuropil | 1 |
| nociceptor nerve ending | 4 |
| nodosal placode | 18 |
| non-neural ectoderm | 11 |
| notochord | 53 |
| nucleus accumbens | 155 |
| nucleus ambiguus | 1 |
| nucleus incertus | 65 |
| nucleus intercalatus | 1 |
| nucleus of anterior commissure | 8 |
| nucleus of cerebellar nuclear complex | 1 |
| nucleus of diagonal band | 89 |
| nucleus of lateral lemniscus | 16 |
| nucleus of lateral olfactory tract | 3 |
| nucleus of midbrain reticular formation | 164 |
| nucleus of posterior commissure | 37 |
| nucleus of solitary tract | 2 |
| nucleus of trapezoid body | 1 |
| nucleus of ventral thalamus | 1 |
| nucleus prepositus | 90 |
| nucleus pulposus | 13 |
| nucleus raphe magnus | 1 |
| nucleus raphe obscurus | 6 |
| nucleus raphe pallidus | 15 |
| nucleus subceruleus | 1 |
| occipital cortex | 51 |
| occipital lobe | 23 |
| occipital pole | 1 |
| occipitofrontal fasciculus | 1 |
| ocular adnexa | 34 |
| ocular surface region | 1 |
| odontoid tissue | 11 |
| olfactory bulb | 128 |
| olfactory bulb external plexiform layer | 8 |
| olfactory cortex | 30 |
| olfactory epithelium | 81 |
| olfactory gland | 1 |
| olfactory pit | 2 |
| olfactory placode | 6 |
| olfactory segment of nasal mucosa | 26 |
| olfactory system | 129 |
| olfactory tubercle | 9 |
| olivary pretectal nucleus | 1 |
| omentum | 293 |
| ommatidium | 17 |
| open tracheal system | 11 |
| opercular part of inferior frontal gyrus | 1 |
| optic chiasma | 2 |
| optic choroid | 103 |
| optic choroid vascular plexus | 40 |
| optic cup | 15 |
| optic disc | 37 |
| optic stalk | 2 |
| optic vesicle | 16 |
| oral cavity | 11 |
| oral epithelium | 3 |
| oral part of spinal trigeminal nucleus | 1 |
| oral pontine reticular nucleus | 1 |
| orbicularis oculi muscle | 1 |
| orbit of skull | 34 |
| orbital part of inferior frontal gyrus | 1 |
| osteoid | 12 |
| otic placode | 10 |
| otic process | 8 |
| otic region | 1 |
| otic vesicle protrusion | 2 |
| outer dental epithelium | 7 |
| outer epithelium | 193 |
| outer medullary collecting duct | 8 |
| outer plexiform layer of retina | 1 |
| outer root sheath companion layer | 3 |
| outer spiral sulcus | 12 |
| outflow part of right ventricle | 1 |
| outflow tract | 19 |
| ovarian cortex | 6 |
| ovarian follicle | 22 |
| ovary | 806 |
| oviduct | 11 |
| oviduct epithelium | 6 |
| pair of nares | 1 |
| palatine tonsil | 24 |
| pallidum | 42 |
| pallium | 16 |
| palmar/plantar sweat gland | 9 |
| pancreas | 1467 |
| pancreas primordium | 1 |
| pancreatic acinus | 75 |
| pancreatic duct | 1 |
| pancreatic epithelial bud | 1 |
| pancreatic lymph node | 20 |
| panniculus adiposus | 2 |
| papillary layer of dermis | 4 |
| parabigeminal nucleus | 3 |
| parabrachial nucleus | 201 |
| paracentral gyrus | 1 |
| paracentral nucleus | 21 |
| parachordal cartilage | 3 |
| parafascicular nucleus | 22 |
| paramedian reticular nucleus | 1 |
| parapyramidal nucleus | 9 |
| pararenal fat | 1 |
| parasolitary nucleus | 20 |
| parasubiculum | 1 |
| paratenial nucleus | 23 |
| paraterminal gyrus | 1 |
| parathyroid epithelium | 3 |
| parathyroid gland | 8 |
| paraventricular nucleus of hypothalamus | 165 |
| paraventricular nucleus of thalamus | 24 |
| paraxial mesoderm | 25 |
| parenchyma of central nervous system | 68 |
| parenchyma of thyroid gland | 2 |
| parietal cortex | 66 |
| parietal endoderm | 6 |
| parietal lobe | 1 |
| parietal operculum | 1 |
| pars intermedia of adenohypophysis | 1 |
| pars tuberalis of adenohypophysis | 16 |
| parvocellular reticular nucleus | 226 |
| pectoral appendage bud mesenchyme | 2 |
| pectoral appendage field | 4 |
| pectoral fin | 12 |
| pectoral fin bud | 6 |
| pedunculopontine tegmental nucleus | 119 |
| pelvic lymph node | 95 |
| penis | 31 |
| perichondrium | 5 |
| periderm | 56 |
| perimysium | 1 |
| perineurium | 6 |
| periocular mesenchyme | 3 |
| periodontium | 10 |
| periolivary nucleus | 8 |
| periosteum | 2 |
| periotic mesenchyme | 18 |
| peripeduncular nucleus | 2 |
| peripheral lymph node | 73 |
| peripheral nervous system | 240 |
| peripheral region of retina | 178 |
| peritoneal cavity | 19 |
| peritoneum | 42 |
| peritrigeminal nucleus | 1 |
| peritubular capillary | 4 |
| perivascular space | 58 |
| periventricular nucleus of hypothalamus | 180 |
| Peyer's patch | 11 |
| pharyngeal arch | 41 |
| pharyngeal arch artery 1 | 6 |
| pharyngeal arch artery 2 | 5 |
| pharyngeal arch artery 3 | 4 |
| pharyngeal arch artery 4 | 1 |
| pharyngeal arch artery 5 | 1 |
| pharyngeal arch artery 6 | 1 |
| pharyngeal arch system | 6 |
| pharyngeal ectoderm | 2 |
| pharyngeal epithelium | 2 |
| pharyngeal gland | 1 |
| pharyngeal mesoderm | 17 |
| pharyngeal pouch | 5 |
| pharyngeal region of foregut | 7 |
| pharyngeal tonsil | 2 |
| pharynx | 84 |
| photoreceptor array | 27 |
| pia mater | 25 |
| pigmented layer of retina | 141 |
| pineal body | 18 |
| pineal tract | 4 |
| piriform cortex | 16 |
| piriform-amygdalar area | 50 |
| pituitary gland | 150 |
| placenta | 432 |
| placenta junctional zone | 2 |
| placenta labyrinth | 4 |
| placental labyrinth villous | 78 |
| placental membrane | 49 |
| placodal ectoderm | 4 |
| pleura | 16 |
| pleural effusion | 6 |
| pleural fluid | 89 |
| pneumatic duct | 1 |
| polster | 3 |
| pons | 418 |
| pontine nuclear group | 54 |
| pontine raphe nucleus | 73 |
| pontine reticular formation | 172 |
| popliteal lymph node | 38 |
| pore | 3 |
| portal triad | 1 |
| portal vein | 6 |
| post-anal tail bud | 26 |
| post-embryonic organism | 268 |
| post-hyoid pharyngeal arch | 1 |
| postcentral gyrus | 6 |
| posterior cingulate cortex | 3 |
| posterior cranial fossa | 9 |
| posterior lateral line | 3 |
| posterior neural rod | 1 |
| posterior nuclear complex of thalamus | 6 |
| posterior nucleus of hypothalamus | 147 |
| posterior nucleus of thalamus | 3 |
| posterior pretectal nucleus | 13 |
| posterior region of body | 21 |
| posterior segment of paracentral lobule | 1 |
| posteroventral cochlear nucleus | 1 |
| postnatal subventricular zone | 98 |
| postsubiculum | 2 |
| precentral gyrus | 5 |
| prechordal plate | 23 |
| precuneus cortex | 1 |
| prefrontal cortex | 860 |
| premacula segment of distal straight tubule | 13 |
| premotor cortex | 2 |
| preoptic area | 88 |
| preplacodal ectoderm | 1 |
| prepuce of penis | 12 |
| presomitic mesoderm | 39 |
| presubiculum | 3 |
| presumptive cephalic mesoderm | 1 |
| presumptive ectoderm | 1 |
| presumptive endoderm | 1 |
| presumptive mesoderm | 4 |
| presumptive midbrain | 2 |
| presumptive retinal pigmented epithelium | 39 |
| pretectal nucleus | 3 |
| pretectal region | 70 |
| primary circulatory organ | 225 |
| primary heart field | 5 |
| primary motor cortex | 792 |
| primary motor cortex layer 5 | 2 |
| primary motor cortex layer 6 | 1 |
| primary somatosensory cortex | 162 |
| primary superior olive | 1 |
| primary visual cortex | 411 |
| primitive heart tube | 1 |
| primitive knot | 4 |
| primitive palate | 1 |
| primitive streak | 16 |
| primitive urogenital sinus | 12 |
| primordium | 59 |
| principal sensory nucleus of trigeminal nerve | 26 |
| proctodeum | 1 |
| proepicardium | 1 |
| proliferative region | 2 |
| pronephric duct | 4 |
| pronephric nephron tubule | 1 |
| pronephros | 29 |
| prostate epithelium | 6 |
| prostate gland | 549 |
| prostate gland anterior lobe | 3 |
| prostate gland dorsal lobe | 3 |
| prostate gland dorsolateral lobe | 1 |
| prostate gland lateral lobe | 2 |
| prostate gland ventral lobe | 3 |
| prostate glandular acinus | 2 |
| proventriculus | 2 |
| proximal convoluted tubule | 54 |
| proximal convoluted tubule segment 1 | 35 |
| proximal convoluted tubule segment 2 | 40 |
| proximal straight tubule | 78 |
| proximal tubule | 268 |
| pseudostratified columnar epithelium | 2 |
| pulmonary alveolar duct | 3 |
| pulmonary alveolus epithelium | 27 |
| pulmonary artery | 4 |
| pulmonary artery endothelium | 2 |
| pulmonary capillary | 1 |
| pulmonary lymph node | 4 |
| pulvinar nucleus | 2 |
| Purkinje cell layer of cerebellar cortex | 5 |
| putamen | 3 |
| pyloric antrum | 4 |
| pyloric gastric gland | 80 |
| pyloric sphincter | 1 |
| pylorus | 1 |
| pyramidal layer of CA1 | 1 |
| pyramidal layer of CA3 | 1 |
| quadriceps femoris | 16 |
| raphe nuclei | 1 |
| rectum | 199 |
| red nucleus | 80 |
| red pulp of spleen | 3 |
| renal afferent arteriole | 5 |
| renal connecting tubule | 110 |
| renal convoluted tubule | 1 |
| renal corpuscle | 2 |
| renal cortex artery | 1 |
| renal cortex interstitium | 3 |
| renal cortex tubule | 19 |
| renal efferent arteriole | 5 |
| renal glomerulus | 40 |
| renal medulla | 8 |
| renal medulla collecting duct | 2 |
| renal medulla interstitium | 8 |
| renal tubule | 8 |
| renal vesicle | 12 |
| reproductive system | 7 |
| respiratory airway | 322 |
| respiratory bronchiole | 45 |
| respiratory system | 18 |
| respiratory system smooth muscle | 10 |
| respiratory tract | 156 |
| respiratory tract epithelium | 36 |
| rete ovarii | 1 |
| rete testis | 1 |
| reticular formation | 4 |
| reticular layer of dermis | 1 |
| reticuloendothelial system | 1 |
| reticulotegmental nucleus | 6 |
| retina | 1001 |
| retrochiasmatic area | 31 |
| retrohippocampal region | 27 |
| retrosplenial region | 31 |
| reuniens nucleus | 3 |
| rhombic lip | 5 |
| rhomboidal nucleus | 2 |
| rhombomere | 12 |
| rib | 43 |
| right cardiac atrium | 4 |
| right ovary | 1 |
| roof of mouth | 12 |
| roof plate | 7 |
| rostral migratory stream | 6 |
| S-shaped body | 26 |
| sagittal stratum | 3 |
| saliva-secreting gland | 120 |
| salivary gland epithelium | 28 |
| salivary gland primordium | 1 |
| saphenous vein | 38 |
| scala vestibuli | 4 |
| scalp | 1 |
| sciatic nerve | 8 |
| sclera | 43 |
| sclerotome | 31 |
| scute | 3 |
| sebaceous gland | 31 |
| secondary heart field | 26 |
| secondary nodular lymphoid tissue | 154 |
| secondary ovarian follicle | 4 |
| secondary palatal shelf | 1 |
| secondary somatosensory cortex | 1 |
| semen | 13 |
| seminal vesicle | 44 |
| seminal vesicle epithelium | 3 |
| seminiferous tubule of testis | 246 |
| sense organ | 3 |
| sensory system | 4 |
| septal nuclear complex | 2 |
| septofimbrial nucleus | 21 |
| septum | 1 |
| septum of telencephalon | 7 |
| septum transversum | 11 |
| serous acinus | 1 |
| shoulder | 38 |
| shoulder joint | 24 |
| sigmoid colon | 131 |
| sinoatrial node | 18 |
| sinus venosus | 5 |
| sinusoid | 19 |
| skeletal joint | 12 |
| skeletal muscle organ, vertebrate | 22 |
| skeletal muscle tissue | 619 |
| skeletal muscle tissue of tibialis anterior | 12 |
| skeleton | 1 |
| skin epidermis | 351 |
| skin epithelium | 8 |
| skin of body | 2164 |
| skin sebaceous gland | 8 |
| skull | 126 |
| slow muscle tissue | 4 |
| small intestine | 789 |
| small intestine Peyer's patch | 2 |
| smooth muscle of esophagus | 1 |
| smooth muscle tissue | 34 |
| soleus muscle | 25 |
| solitary tract nuclear complex | 1 |
| somatic layer of lateral plate mesoderm | 1 |
| somatic muscle, invertebrate | 167 |
| somatosensory cortex | 16 |
| somatosensory system | 14 |
| somite | 145 |
| spermathecum | 2 |
| sphincter muscle | 2 |
| sphincter pupillae | 2 |
| spinal cord | 1439 |
| spinal cord lateral motor column | 2 |
| spinal cord medial motor column | 1 |
| spinal nucleus of trigeminal nerve | 163 |
| spiracle (sensu Vertebrata) | 2 |
| spiral organ of cochlea | 9 |
| splanchnic layer of lateral plate mesoderm | 11 |
| spleen | 1103 |
| splenium of the corpus callosum | 1 |
| spongiotrophoblast layer | 9 |
| sputum | 84 |
| squamous epithelium | 14 |
| stellate reticulum | 6 |
| stomach | 906 |
| stomach primordium | 2 |
| stomach smooth muscle | 2 |
| stomodeum | 3 |
| strand of hair | 2 |
| stratified squamous epithelium | 2 |
| stratum basale of epidermis | 13 |
| stratum corneum of epidermis | 1 |
| stratum granulosum of epidermis | 2 |
| stratum intermedium of tooth | 6 |
| stratum spinosum of epidermis | 29 |
| stria vascularis of cochlear duct | 14 |
| striated duct of salivary gland | 1 |
| striated muscle tissue | 2 |
| striatum | 637 |
| stroma | 52 |
| subcapsular sinus ceiling | 5 |
| subcapsular sinus floor | 2 |
| subcapsular sinus of lymph node | 5 |
| subcommissural organ | 6 |
| subcutaneous adipose tissue | 147 |
| subcutaneous lymph node | 958 |
| subdivision of digestive tract | 29 |
| subdural space | 22 |
| subfornical organ | 32 |
| subiculum | 65 |
| submandibular gland | 58 |
| submucosa of esophagus | 89 |
| submucosal gland | 25 |
| subparafascicular nucleus | 140 |
| subparaventricular zone | 89 |
| substantia innominata | 254 |
| substantia nigra | 159 |
| substantia nigra pars compacta | 71 |
| substantia propria of cornea | 11 |
| subthalamic nucleus | 75 |
| superficial white layer of superior colliculus | 18 |
| superior colliculus | 315 |
| superior frontal gyrus | 8 |
| superior olivary complex | 12 |
| superior parietal cortex | 1 |
| superior temporal gyrus | 1 |
| superior vestibular nucleus | 1 |
| supplemental motor cortex | 1 |
| suprachiasmatic nucleus | 48 |
| suprageniculate nucleus of thalamus | 9 |
| supragenual nucleus of pontine tegmentum | 18 |
| supramammillary nucleus | 46 |
| supramarginal gyrus | 1 |
| supraoptic nucleus | 31 |
| suprarostral ala | 2 |
| supratrigeminal nucleus | 4 |
| swim bladder | 5 |
| syncytiotrophoblast | 45 |
| synovial fluid | 83 |
| synovial joint | 19 |
| synovial membrane of synovial joint | 9 |
| tail | 1 |
| taste bud | 5 |
| tectal plate | 7 |
| tegmentum | 13 |
| telencephalic ventricle | 2 |
| telencephalon | 235 |
| temporal cortex | 59 |
| temporal lobe | 41 |
| temporal pole | 1 |
| tendon | 49 |
| terminal bronchiole | 45 |
| terminal bronchiole epithelium | 2 |
| terminal part of digestive tract | 5 |
| testis | 780 |
| tetrapod parietal bone | 1 |
| thalamic complex | 421 |
| thalamic reticular nucleus | 33 |
| theca externa | 3 |
| theca interna | 4 |
| thick ascending limb of loop of Henle | 68 |
| third ventricle | 1 |
| thoracic aorta | 8 |
| thymus | 1097 |
| thyroid gland | 203 |
| thyroid primordium | 2 |
| tibialis anterior | 14 |
| tip | 1 |
| tip of renal papilla | 1 |
| tissue | 22 |
| tongue | 38 |
| tongue muscle | 1 |
| tonsil | 382 |
| tonsil germinal center | 1 |
| tooth bud | 32 |
| tooth enamel organ | 12 |
| tooth row | 1 |
| torus longitudinalis | 2 |
| trachea | 281 |
| trachea gland | 1 |
| tracheobronchial tree | 15 |
| transparent eye structure | 4 |
| transverse colon | 164 |
| triangular part of inferior frontal gyrus | 1 |
| triangular septal nucleus | 8 |
| trigeminal ganglion | 35 |
| trigeminal placode complex | 2 |
| trophectoderm | 6 |
| trophoblast | 28 |
| trunk | 32 |
| tuber cinereum | 28 |
| tuberomammillary nucleus | 42 |
| tunica intima | 1 |
| tympanic membrane | 22 |
| umbilical cord blood | 110 |
| umbilical vein endothelium | 2 |
| uncondensed odontogenic mesenchyme | 1 |
| upper deciduous premolar 5 | 1 |
| upper fourth secondary molar tooth | 1 |
| upper premolar tooth | 1 |
| upper respiratory tract | 6 |
| upper rhombic lip | 15 |
| upper third secondary premolar tooth | 1 |
| ureter | 60 |
| ureteric bud | 6 |
| ureteric bud tip | 3 |
| urethra | 33 |
| urinary bladder | 116 |
| urinary bladder urothelium | 6 |
| urine | 15 |
| urogenital fold | 6 |
| urothelium | 51 |
| urothelium of ureter | 3 |
| uterine cervix | 118 |
| uterus | 570 |
| utricle of membranous labyrinth | 95 |
| uvea | 9 |
| vagal neural crest | 3 |
| vagina | 23 |
| valve | 5 |
| vas deferens | 16 |
| vasa recta | 16 |
| vasa recta ascending limb | 4 |
| vasa recta descending limb | 5 |
| vasa vasorum | 1 |
| vascular system | 115 |
| vasculature | 283 |
| vasculature of brain | 62 |
| vasculature of integument | 7 |
| vastus lateralis | 32 |
| vault of skull | 35 |
| vein | 203 |
| venous system smooth muscle | 2 |
| ventral anterior nucleus of thalamus | 2 |
| ventral body wall | 1 |
| ventral cochlear nucleus | 10 |
| ventral funiculus of spinal cord | 1 |
| ventral horn of spinal cord | 20 |
| ventral lateral geniculate nucleus | 69 |
| ventral lateral nucleus of thalamus | 6 |
| ventral nerve cord | 210 |
| ventral pancreatic duct | 126 |
| ventral part of telencephalon | 43 |
| ventral posterolateral nucleus | 1 |
| ventral posteromedial nucleus of thalamus | 2 |
| ventral premammillary nucleus | 28 |
| ventral striatum | 69 |
| ventral tegmental area | 88 |
| ventral tegmental nucleus | 17 |
| ventral thalamus | 3 |
| ventral wall of dorsal aorta | 7 |
| ventral zone | 3 |
| ventricular zone | 57 |
| ventromedial nucleus of hypothalamus | 50 |
| ventromedial thalamic nucleus | 2 |
| ventrum | 1 |
| venule | 17 |
| vermiform appendix | 23 |
| vertebral bone 1 | 3 |
| vertebral bone 2 | 1 |
| vertebral endplate | 9 |
| vessel | 2 |
| vestibular ganglion | 3 |
| vestibular membrane of cochlear duct | 5 |
| vestibulocochlear ganglion | 5 |
| visceral abdominal adipose tissue | 52 |
| visceral endoderm | 16 |
| visceral muscle tissue | 4 |
| visceral smooth muscle tissue | 5 |
| visceral yolk sac | 2 |
| visual cortex | 130 |
| visual processing part of nervous system | 1265 |
| vitelline membrane | 2 |
| wall of blood vessel | 2 |
| white adipose tissue | 260 |
| white matter | 141 |
| white matter of cerebellum | 4 |
| white matter of spinal cord | 1 |
| white pulp of spleen | 1 |
| wing | 7 |
| yolk | 17 |
| yolk sac | 299 |
| yolk sac endoderm | 2 |
| yolk syncytial layer | 4 |
| zona fasciculata of adrenal gland | 18 |
| zona glomerulosa of adrenal gland | 7 |
| zona incerta | 151 |
| zona limitans intrathalamica | 2 |
| zona reticularis of adrenal gland | 2 |
| zone of skin | 34 |
| zygote stage | 4 |
| Ontology | Marker gene sets |
|---|---|
| abnormal cell | 2 |
| absorptive cell | 6 |
| acinar cell | 76 |
| acinar cell of salivary gland | 7 |
| acinar cell of sebaceous gland | 7 |
| activated CD4-negative, CD8-negative type I NK T cell | 1 |
| activated CD4-positive, alpha-beta T cell | 52 |
| activated CD4-positive, alpha-beta T cell, human | 7 |
| activated CD8-positive, alpha-beta T cell | 57 |
| activated CD8-positive, alpha-beta T cell, human | 5 |
| activated type II NK T cell | 2 |
| adaxial cell | 7 |
| adipocyte | 157 |
| adipose dendritic cell | 1 |
| adipose macrophage | 4 |
| adipose microvascular endothelial cell | 1 |
| adrenal gland glandular cell | 1 |
| adrenergic neuron | 4 |
| adrenocorticotropic hormone secreting cell | 2 |
| adult endothelial progenitor cell | 4 |
| adult skeletal muscle myoblast | 8 |
| adventitial cell | 7 |
| afferent neuron | 4 |
| airway submucosal gland collecting duct epithelial cell | 1 |
| alarm substance cell | 7 |
| alpha motor neuron | 1 |
| alpha-beta T cell | 27 |
| alternatively activated macrophage | 153 |
| alveolar capillary type 1 endothelial cell | 19 |
| alveolar capillary type 2 endothelial cell | 23 |
| alveolar macrophage | 178 |
| alveolar type 1 fibroblast cell | 12 |
| alveolar type 2 fibroblast cell | 22 |
| amacrine cell | 294 |
| ameloblast | 4 |
| amygdala excitatory neuron | 20 |
| angioblastic mesenchymal cell | 4 |
| animal zygote | 1 |
| anterior visceral endoderm cell | 2 |
| antibody secreting cell | 2 |
| aortic endothelial cell | 13 |
| aortic smooth muscle cell | 7 |
| appendix glandular cell | 1 |
| arachnoid barrier cell | 21 |
| arcade cell | 7 |
| articular chondrocyte | 1 |
| astrocyte | 924 |
| astrocyte of the cerebellum | 4 |
| astrocyte of the cerebral cortex | 47 |
| astrocyte of the forebrain | 1 |
| astrocyte of the spinal cord | 1 |
| atrioventricular bundle cell | 3 |
| auditory epithelial cell | 2 |
| auditory epithelial supporting cell | 1 |
| auditory hair cell | 3 |
| autonomic neuron | 1 |
| B cell | 1783 |
| B-1 B cell | 22 |
| B-1a B cell | 12 |
| B-2 B cell | 10 |
| B-lymphoblast | 1 |
| basal cell | 294 |
| basal cell of epidermis | 43 |
| basal cell of epithelium of bronchus | 7 |
| basal cell of epithelium of lobular bronchiole | 4 |
| basal cell of epithelium of respiratory bronchiole | 4 |
| basal cell of epithelium of trachea | 4 |
| basal cell of olfactory epithelium | 2 |
| basal cell of prostate epithelium | 18 |
| basal cell of prostatic acinus | 2 |
| basal cell of urothelium | 4 |
| basal epithelial cell of tracheobronchial tree | 3 |
| basal proper cell of olfactory epithelium | 2 |
| basket cell | 2 |
| basophil | 126 |
| basophil cell of pars distalis of adenohypophysis | 4 |
| basophil mast progenitor cell | 15 |
| basophil progenitor cell | 15 |
| Be cell | 2 |
| Bergmann glial cell | 33 |
| BEST4+ intestinal epithelial cell, human | 3 |
| bipolar neuron | 8 |
| bistratified retinal ganglion cell | 1 |
| bladder cell | 4 |
| bladder urothelial cell | 6 |
| blastoderm cell | 15 |
| blood cell | 67 |
| blood vessel endothelial cell | 65 |
| blood vessel smooth muscle cell | 9 |
| blue sensitive photoreceptor cell | 1 |
| Bm3 B cell | 1 |
| Bm4 B cell | 11 |
| bone cell | 7 |
| bone marrow cell | 28 |
| bone marrow hematopoietic cell | 1 |
| bone marrow macrophage | 11 |
| border cell of cochlea | 3 |
| border follicle cell | 2 |
| brain microvascular endothelial cell | 11 |
| brain pericyte | 4 |
| brain vascular cell | 2 |
| bronchial epithelial cell | 28 |
| bronchial goblet cell | 3 |
| bronchial smooth muscle cell | 10 |
| bronchioalveolar stem cell | 2 |
| bronchus fibroblast of lung | 1 |
| brown adipocyte | 50 |
| brown preadipocyte | 2 |
| brush border cell of the proximal tubule | 3 |
| brush border epithelial cell | 2 |
| brush cell | 87 |
| brush cell of epithelium proper of large intestine | 2 |
| brush cell of trachebronchial tree | 2 |
| Caenorhabditis hypodermal cell | 25 |
| Cajal-Retzius cell | 46 |
| cap cell | 3 |
| capillary endothelial cell | 281 |
| cardiac blood vessel endothelial cell | 1 |
| cardiac endothelial cell | 81 |
| cardiac glial cell | 1 |
| cardiac mesenchymal cell | 24 |
| cardiac muscle cell | 203 |
| cardiac muscle myoblast | 4 |
| cardiac neuron | 25 |
| cardiac pacemaker cell of sinoatrial node | 1 |
| cardiac valve cell | 13 |
| cardiac ventricle fibroblast | 6 |
| cardioblast | 10 |
| cardiocyte | 21 |
| caudal ganglionic eminence derived interneuron | 28 |
| CD103-positive dendritic cell | 4 |
| CD115-positive monocyte OR common dendritic progenitor | 2 |
| CD14-low, CD16-positive monocyte | 26 |
| CD14-positive monocyte | 56 |
| CD14-positive, CD16-low monocyte | 1 |
| CD14-positive, CD16-negative classical monocyte | 23 |
| CD14-positive, CD16-positive monocyte | 81 |
| CD141-positive myeloid dendritic cell | 6 |
| CD16-negative, CD56-bright natural killer cell, human | 119 |
| CD16-positive myeloid dendritic cell | 2 |
| CD16-positive, CD56-dim natural killer cell, human | 132 |
| CD1c-positive myeloid dendritic cell | 5 |
| CD22-positive, CD38-low small pre-B cell | 8 |
| CD24-positive, CD4 single-positive thymocyte | 1 |
| CD27-negative gamma-delta T cell | 1 |
| CD27-positive gamma-delta T cell | 1 |
| CD34-positive, CD38-negative multipotent progenitor cell | 1 |
| CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor | 3 |
| CD38-positive naive B cell | 4 |
| CD4-positive helper T cell | 28 |
| CD4-positive, alpha-beta cytotoxic T cell | 47 |
| CD4-positive, alpha-beta memory T cell | 208 |
| CD4-positive, alpha-beta T cell | 1386 |
| CD4-positive, alpha-beta thymocyte | 14 |
| CD4-positive, CD25-positive, alpha-beta regulatory T cell | 71 |
| CD4-positive, CD8-intermediate double-positive thymocyte | 5 |
| CD56-negative, CD161-positive immature natural killer cell, human | 2 |
| CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell | 3 |
| CD8-alpha-beta-positive, alpha-beta intraepithelial T cell | 6 |
| CD8-positive, alpha-beta cytokine secreting effector T cell | 73 |
| CD8-positive, alpha-beta cytotoxic T cell | 102 |
| CD8-positive, alpha-beta memory T cell | 327 |
| CD8-positive, alpha-beta memory T cell, CD45RO-positive | 1 |
| CD8-positive, alpha-beta regulatory T cell | 1 |
| CD8-positive, alpha-beta T cell | 1142 |
| CD8-positive, alpha-beta thymocyte | 9 |
| CD8aa(I) thymocyte | 4 |
| CD94-positive natural killer cell, mouse | 2 |
| cell of skeletal muscle | 65 |
| central memory CD4-positive, alpha-beta T cell | 136 |
| central memory CD8-positive, alpha-beta T cell | 69 |
| central nervous system macrophage | 14 |
| central nervous system neuron | 3 |
| central nervous system pericyte | 1 |
| centrilobular region hepatocyte | 9 |
| centripetally migrating follicle cell | 1 |
| centroblast | 2 |
| centrocyte | 2 |
| cerebellar Golgi cell | 17 |
| cerebellar granule cell | 27 |
| cerebellar granule cell precursor | 7 |
| cerebellar inhibitory GABAergic interneuron | 17 |
| cerebellar neuron | 6 |
| cerebellar stellate cell | 8 |
| cerebellum glutamatergic neuron | 4 |
| cerebral cortex endothelial cell | 29 |
| cerebral cortex GABAergic interneuron | 62 |
| cerebral cortex glial cell | 1 |
| cerebral cortex neuron | 22 |
| cerebral cortex pyramidal neuron | 3 |
| chandelier cell | 44 |
| chandelier pvalb GABAergic cortical interneuron | 11 |
| chemoreceptor cell | 16 |
| chief cell of parathyroid gland | 2 |
| cholangiocyte | 70 |
| cholinergic neuron | 259 |
| chondroblast | 19 |
| chondrocyte | 124 |
| choroid plexus epithelial cell | 45 |
| chromaffin cell | 20 |
| chromaffin cell of adrenal gland | 3 |
| ciliary muscle cell | 8 |
| ciliated cell | 105 |
| ciliated cell of the bronchus | 10 |
| ciliated columnar cell of tracheobronchial tree | 8 |
| ciliated epithelial cell | 40 |
| ciliated olfactory receptor neuron | 1 |
| circulating endothelial cell | 2 |
| class switched memory B cell | 42 |
| classical monocyte | 185 |
| Claudius cell | 7 |
| clear cell of eccrine sweat gland | 1 |
| club cell | 105 |
| club-like cell of the urethral epithelium | 1 |
| CNS neuron (sensu Vertebrata) | 1 |
| cochlea auditory hair cell | 9 |
| cochlear inner hair cell | 14 |
| cochlear outer hair cell | 15 |
| coelomocyte | 10 |
| cold sensing thermoreceptor cell | 7 |
| colon endothelial cell | 12 |
| colon epithelial cell | 20 |
| colon glandular cell | 1 |
| colon goblet cell | 7 |
| colon macrophage | 1 |
| columnar cell of endocervix | 3 |
| columnar/cuboidal epithelial cell | 5 |
| common dendritic progenitor | 2 |
| common lymphoid progenitor | 53 |
| common myeloid progenitor | 62 |
| common myeloid progenitor, CD34-positive | 7 |
| compound eye cone cell | 5 |
| compound eye photoreceptor cell | 2 |
| cone retinal bipolar cell | 32 |
| conjunctiva goblet cell | 3 |
| conjunctival epithelial cell | 5 |
| connective tissue cell | 3 |
| conventional dendritic cell | 714 |
| copper accumulating cell | 2 |
| corneal endothelial cell | 3 |
| corneal epithelial cell | 14 |
| corneocyte | 1 |
| cortical cell of adrenal gland | 11 |
| cortical interneuron | 6 |
| cortical thymic epithelial cell | 20 |
| corticothalamic-projecting glutamatergic cortical neuron | 19 |
| corticotroph | 8 |
| cranial motor neuron | 8 |
| crypt olfactory receptor neuron | 4 |
| crystal cell | 15 |
| crystallin accumulating cell | 10 |
| cultured cell | 13 |
| cumulus cell | 10 |
| cytotoxic T cell | 64 |
| dark cell of eccrine sweat gland | 1 |
| decidual cell | 23 |
| decidual natural killer cell, human | 5 |
| decidual pericyte | 6 |
| Deiter's cell | 14 |
| dendritic cell | 1702 |
| dental pulp cell | 4 |
| dentate gyrus granule cell | 7 |
| dentate gyrus neuron | 4 |
| deuterosomal cell | 3 |
| differentiation-committed oligodendrocyte precursor | 30 |
| diffuse bipolar 2 cell | 1 |
| diffuse bipolar 3a cell | 1 |
| diffuse bipolar 3b cell | 1 |
| diffuse bipolar 4 cell | 2 |
| diffuse bipolar 6 cell | 1 |
| direct pathway medium spiny neuron | 12 |
| distal tip cell (sensu Nematoda) | 2 |
| DN1 thymic pro-T cell | 5 |
| DN2 thymocyte | 15 |
| DN2a thymocyte | 1 |
| DN2b thymocyte | 1 |
| DN3 thymocyte | 28 |
| DN4 thymocyte | 3 |
| dopaminergic neuron | 177 |
| double negative memory B cell | 19 |
| double negative T regulatory cell | 3 |
| double negative thymocyte | 93 |
| double-positive blast | 2 |
| double-positive, alpha-beta thymocyte | 110 |
| duct epithelial cell | 7 |
| duodenal goblet cell | 1 |
| duodenum glandular cell | 2 |
| ear hair cell | 7 |
| early embryonic cell (metazoa) | 3 |
| early lymphoid progenitor | 46 |
| early pro-B cell | 2 |
| early promyelocyte | 3 |
| early spermatid | 40 |
| eccentric medium spiny neuron | 14 |
| eccrine cell | 7 |
| ectodermal cell | 51 |
| effector CD4-positive, alpha-beta T cell | 35 |
| effector CD8-positive, alpha-beta T cell | 99 |
| effector memory CD4-positive, alpha-beta T cell | 150 |
| effector memory CD4-positive, alpha-beta T cell, terminally differentiated | 8 |
| effector memory CD45RA-positive, alpha-beta T cell, terminally differentiated | 11 |
| effector memory CD8-positive, alpha-beta T cell | 232 |
| effector memory CD8-positive, alpha-beta T cell, terminally differentiated | 48 |
| effector T cell | 35 |
| efferent neuron | 1 |
| elicited macrophage | 7 |
| embryonic blood vessel endothelial progenitor cell | 9 |
| embryonic cell (metazoa) | 19 |
| embryonic fibroblast | 105 |
| embryonic stem cell | 113 |
| endo-epithelial cell | 4 |
| endocardial cell | 70 |
| endocrine cell | 41 |
| endocrine-paracrine cell of prostate gland | 6 |
| endodermal cell | 70 |
| endometrial ciliated epithelial cell | 4 |
| endometrial microvascular endothelial cell | 4 |
| endothelial cell | 1924 |
| endothelial cell of arteriole | 9 |
| endothelial cell of artery | 242 |
| endothelial cell of coronary artery | 8 |
| endothelial cell of hepatic sinusoid | 26 |
| endothelial cell of high endothelial venule | 14 |
| endothelial cell of lymphatic vessel | 317 |
| endothelial cell of pericentral hepatic sinusoid | 1 |
| endothelial cell of periportal hepatic sinusoid | 2 |
| endothelial cell of sinusoid | 14 |
| endothelial cell of uterus | 5 |
| endothelial cell of vascular tree | 249 |
| endothelial cell of venule | 17 |
| endothelial cell of viscerocranial mucosa | 1 |
| endothelial stalk cell | 47 |
| endothelial tip cell | 51 |
| enteric neuron | 37 |
| enteric smooth muscle cell | 2 |
| enterochromaffin-like cell | 2 |
| enterocyte | 291 |
| enterocyte of colon | 10 |
| enterocyte of epithelium of intestinal villus | 10 |
| enterocyte of epithelium of large intestine | 9 |
| enterocyte of epithelium of small intestine | 46 |
| enterocyte of epithelium proper of duodenum | 2 |
| enteroendocrine cell | 120 |
| enteroendocrine cell of colon | 5 |
| enteroglial cell | 3 |
| enucleate erythrocyte | 54 |
| enucleated reticulocyte | 2 |
| eosinophil | 92 |
| eosinophil progenitor cell | 24 |
| ependymal cell | 244 |
| epiblast cell | 23 |
| epicardial adipocyte | 22 |
| epidermal cell | 115 |
| epidermal melanocyte | 1 |
| epidermoblast | 1 |
| epididymis glandular cell | 2 |
| epithelial cell | 936 |
| epithelial cell of alimentary canal | 6 |
| epithelial cell of amnion | 1 |
| epithelial cell of cervix | 2 |
| epithelial cell of distal tubule | 23 |
| epithelial cell of early distal convoluted tubule | 1 |
| epithelial cell of endometrial gland | 3 |
| epithelial cell of esophagus | 9 |
| epithelial cell of exocrine pancreas | 2 |
| epithelial cell of lacrimal drainage system | 5 |
| epithelial cell of lacrimal sac | 1 |
| epithelial cell of large intestine | 8 |
| epithelial cell of late distal convoluted tubule | 1 |
| epithelial cell of lung | 37 |
| epithelial cell of nephron | 19 |
| epithelial cell of pancreas | 14 |
| epithelial cell of parathyroid gland | 1 |
| epithelial cell of prostate | 19 |
| epithelial cell of proximal tubule | 192 |
| epithelial cell of proximal tubule segment 1 | 48 |
| epithelial cell of proximal tubule segment 2 | 42 |
| epithelial cell of proximal tubule segment 3 | 51 |
| epithelial cell of small intestine | 9 |
| epithelial cell of stomach | 16 |
| epithelial cell of stratum germinativum of esophagus | 5 |
| epithelial cell of thymus | 32 |
| epithelial cell of thyroid gland | 1 |
| epithelial cell of urethra | 2 |
| epithelial cell of uterus | 30 |
| epithelial fate stem cell | 5 |
| erythroblast | 149 |
| erythrocyte | 221 |
| erythroid lineage cell | 262 |
| erythroid progenitor cell | 79 |
| erythroid progenitor cell, mammalian | 4 |
| excitatory neuron | 984 |
| excretory cell | 50 |
| exhausted T cell | 91 |
| exocrine cell | 12 |
| external pillar cell of cochlea | 2 |
| extraembryonic cell | 2 |
| extratelencephalic-projecting glutamatergic cortical neuron | 5 |
| extravillous trophoblast | 42 |
| eye photoreceptor cell | 3 |
| fallopian tube ciliated cell | 7 |
| fallopian tube secretory epithelial cell | 2 |
| fast muscle cell | 19 |
| fat body cell | 22 |
| female germ cell | 14 |
| fenestrated cell | 8 |
| fetal cardiomyocyte | 6 |
| fetal liver hematopoietic progenitor cell | 1 |
| fibro/adipogenic progenitor cell | 12 |
| fibroblast | 2070 |
| fibroblast of breast | 1 |
| fibroblast of cardiac tissue | 76 |
| fibroblast of choroid plexus | 2 |
| fibroblast of connective tissue of prostate | 3 |
| fibroblast of dermis | 6 |
| fibroblast of lung | 120 |
| fibroblast of mammary gland | 18 |
| fibroblast of papillary layer of dermis | 4 |
| fibroblast of the reticular layer of dermis | 1 |
| fibroblastic reticular cell | 6 |
| fibrocyte | 12 |
| flat midget bipolar cell | 1 |
| foam cell | 1 |
| follicle cell of egg chamber | 117 |
| follicle stem cell (sensu Arthropoda) | 14 |
| follicular B cell | 46 |
| follicular cell of ovary | 1 |
| follicular dendritic cell | 35 |
| follicular epithelial cell | 4 |
| folliculostellate cell | 3 |
| forebrain neuroblast | 4 |
| foreskin fibroblast | 6 |
| foveolar cell of stomach | 12 |
| fraction A pre-pro B cell | 12 |
| GABAergic interneuron | 51 |
| GABAergic neuron | 6873 |
| gallbladder glandular cell | 2 |
| gamma motor neuron | 1 |
| gamma-delta T cell | 376 |
| gamma-delta thymocyte | 1 |
| ganglion mother cell | 4 |
| garland cell | 2 |
| gastric goblet cell | 4 |
| gastrointestinal tract (lamina propria) macrophage of small intestine | 14 |
| germ cell | 57 |
| germ line cell | 16 |
| germ line stem cell | 10 |
| germinal center B cell | 154 |
| giant bipolar cell | 2 |
| gingival epithelial cell | 1 |
| GIP cell | 2 |
| glandular cell of endometrium | 8 |
| glandular cell of esophagus | 1 |
| glandular cell of stomach | 4 |
| glandular epithelial cell | 30 |
| glial cell | 430 |
| glial restricted tripotential precursor cell | 4 |
| glioblast | 83 |
| globose cell of olfactory epithelium | 3 |
| glomerular capillary endothelial cell | 10 |
| glomerular cell | 1 |
| glomerular endothelial cell | 28 |
| glomerular mesangial cell | 1 |
| GLR cell | 1 |
| glutamatergic neuron | 7143 |
| glycinergic neuron | 584 |
| goblet cell | 166 |
| gonadtroph | 11 |
| granular cell of epidermis | 19 |
| granule cell | 70 |
| granulocyte | 135 |
| granulocyte monocyte progenitor cell | 110 |
| granulocytopoietic cell | 3 |
| granulosa cell | 81 |
| green sensitive photoreceptor cell | 2 |
| group 1 innate lymphoid cell | 45 |
| group 2 innate lymphoid cell | 57 |
| group 2 innate lymphoid cell, mouse | 8 |
| group 3 innate lymphoid cell | 63 |
| gut endothelial cell | 6 |
| hair follicle cell | 43 |
| hair follicle dermal papilla cell | 1 |
| hair follicle dermal papilla cell of scalp | 1 |
| hair follicular keratinocyte | 3 |
| hair germinal matrix cell | 3 |
| hatching gland cell | 12 |
| helper T cell | 32 |
| hemangioblast | 10 |
| hematopoietic cell | 35 |
| hematopoietic lineage restricted progenitor cell | 3 |
| hematopoietic multipotent progenitor cell | 105 |
| hematopoietic oligopotent progenitor cell | 1 |
| hematopoietic precursor cell | 48 |
| hematopoietic stem cell | 318 |
| hemocyte (sensu Arthropoda) | 25 |
| Hensen cell | 8 |
| hepatic oval stem cell | 1 |
| hepatic portal fibroblast | 1 |
| hepatic stellate cell | 58 |
| hepatic stem cell | 8 |
| hepatoblast | 18 |
| hepatocyte | 372 |
| hillock cell | 4 |
| hillock cell of urethral epithelium | 1 |
| hippocampal astrocyte | 2 |
| hippocampal CA1-3 neuron | 13 |
| hippocampal CA4 neuron | 9 |
| hippocampal granule cell | 13 |
| hippocampal interneuron | 16 |
| hippocampal neuron | 5 |
| hippocampal pyramidal neuron | 39 |
| histaminergic neuron | 18 |
| Hofbauer cell | 13 |
| hyalocyte | 1 |
| hypendymal cell | 4 |
| hypertrophic chondrocyte | 5 |
| hypothalamus cell | 10 |
| IgA memory B cell | 6 |
| IgA plasma cell | 42 |
| IgA plasmablast | 12 |
| IgD plasmablast | 3 |
| IgG plasma cell | 45 |
| IgG plasmablast | 10 |
| IgM memory B cell | 26 |
| IgM plasma cell | 24 |
| IgM plasmablast | 1 |
| ILC1 | 13 |
| immature B cell | 41 |
| immature conventional dendritic cell | 1 |
| immature gamma-delta T cell | 2 |
| immature microglial cell | 1 |
| immature natural killer cell | 8 |
| immature neutrophil | 11 |
| immature NK T cell | 27 |
| immature single positive thymocyte | 1 |
| immature T cell | 7 |
| indirect pathway medium spiny neuron | 6 |
| induced T-regulatory cell | 41 |
| inflammatory cell | 5 |
| inflammatory macrophage | 156 |
| inhibitory interneuron | 29 |
| inhibitory motor neuron | 22 |
| inhibitory neuron | 982 |
| innate effector T cell | 1 |
| innate lymphoid cell | 194 |
| inner cell mass cell | 5 |
| inner phalangeal cell | 8 |
| inner renal cortex cell | 1 |
| inner root sheath cell | 10 |
| insulin secreting cell | 1 |
| interdental cell of cochlea | 11 |
| interfollicle cell | 11 |
| intermediate mesodermal cell | 3 |
| intermediate monocyte | 33 |
| internal pillar cell of cochlea | 4 |
| interneuron | 317 |
| interstitial cell | 1 |
| interstitial cell of Cajal | 14 |
| interstitial cell of ovary | 9 |
| intestinal crypt stem cell | 8 |
| intestinal crypt stem cell of colon | 2 |
| intestinal crypt stem cell of large intestine | 2 |
| intestinal crypt stem cell of small intestine | 1 |
| intestinal enteroendocrine cell | 25 |
| intestinal epithelial cell | 29 |
| intestinal tuft cell | 12 |
| intestine goblet cell | 21 |
| intraepithelial lymphocyte | 12 |
| intrahepatic cholangiocyte | 3 |
| intratelencephalic-projecting glutamatergic cortical neuron | 57 |
| invaginating midget bipolar cell | 1 |
| ionocyte | 90 |
| iridoblast | 1 |
| iridophore | 15 |
| iris pigment epithelial cell | 3 |
| iron accumulating cell | 1 |
| juxtaglomerular complex cell | 14 |
| Kenyon cell | 13 |
| keratinized cell of hair follicle | 2 |
| keratinized cell of the oral mucosa | 2 |
| keratinized squamous cell of esophagus | 1 |
| keratinocyte | 206 |
| keratinocyte stem cell | 13 |
| keratocyte | 8 |
| kidney afferent arteriole cell | 4 |
| kidney afferent arteriole endothelial cell | 1 |
| kidney arterial blood vessel cell | 3 |
| kidney capillary endothelial cell | 3 |
| kidney cell | 8 |
| kidney collecting duct alpha-intercalated cell | 12 |
| kidney collecting duct beta-intercalated cell | 3 |
| kidney collecting duct cell | 27 |
| kidney collecting duct epithelial cell | 7 |
| kidney collecting duct intercalated cell | 54 |
| kidney collecting duct principal cell | 60 |
| kidney connecting tubule alpha-intercalated cell | 1 |
| kidney connecting tubule epithelial cell | 72 |
| kidney connecting tubule principal cell | 4 |
| kidney corpuscule cell | 2 |
| kidney cortex artery cell | 1 |
| kidney cortex collecting duct epithelial cell | 3 |
| kidney cortex collecting duct principal cell | 17 |
| kidney cortex tubule cell | 19 |
| kidney cortical cell | 3 |
| kidney distal convoluted tubule epithelial cell | 118 |
| kidney efferent arteriole cell | 4 |
| kidney efferent arteriole endothelial cell | 1 |
| kidney epithelial cell | 37 |
| kidney glomerular epithelial cell | 4 |
| kidney granular cell | 7 |
| kidney inner medulla collecting duct epithelial cell | 5 |
| kidney inner medulla collecting duct principal cell | 9 |
| kidney interstitial cell | 17 |
| kidney interstitial fibroblast | 1 |
| kidney interstitial myofibroblast | 14 |
| kidney loop of Henle ascending limb epithelial cell | 36 |
| kidney loop of Henle cortical thick ascending limb epithelial cell | 9 |
| kidney loop of Henle descending limb epithelial cell | 24 |
| kidney loop of Henle epithelial cell | 58 |
| kidney loop of Henle medullary thick ascending limb epithelial cell | 13 |
| kidney loop of Henle thick ascending limb epithelial cell | 58 |
| kidney loop of Henle thin ascending limb epithelial cell | 24 |
| kidney loop of Henle thin descending limb epithelial cell | 34 |
| kidney medulla cell | 4 |
| kidney outer medulla collecting duct epithelial cell | 2 |
| kidney outer medulla collecting duct intercalated cell | 1 |
| kidney outer medulla collecting duct principal cell | 4 |
| kidney proximal convoluted tubule epithelial cell | 34 |
| kidney proximal straight tubule epithelial cell | 31 |
| kidney resident macrophage | 9 |
| kidney tubule cell | 8 |
| Kit-positive granulocyte monocyte progenitor | 3 |
| Kolmer-Agduhr neuron | 1 |
| koniocellular cell | 1 |
| Kupffer cell | 114 |
| L cone cell | 1 |
| L2 intratelencephalic projecting glutamatergic neuron | 35 |
| L2/3 intratelencephalic projecting glutamatergic neuron | 145 |
| L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex | 62 |
| L2/3-6 intratelencephalic projecting glutamatergic neuron | 91 |
| L3 intratelencephalic projecting glutamatergic neuron | 10 |
| L4 intratelencephalic projecting glutamatergic neuron | 44 |
| L4/5 intratelencephalic projecting glutamatergic neuron | 53 |
| L4/5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex | 11 |
| L5 extratelencephalic projecting glutamatergic cortical neuron | 104 |
| L5 intratelencephalic projecting glutamatergic neuron | 89 |
| L5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex | 3 |
| L5 non-Martinotti sst GABAergic interneuron (Mmus) | 1 |
| L5/6 near-projecting glutamatergic neuron | 28 |
| L5/6 near-projecting glutamatergic neuron of the primary motor cortex | 59 |
| L6 corticothalamic-projecting glutamatergic cortical neuron | 73 |
| L6 intratelencephalic projecting Car3 glutamatergic neuron | 3 |
| L6 intratelencephalic projecting glutamatergic neuron | 149 |
| L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex | 10 |
| L6b glutamatergic cortical neuron | 93 |
| L6b glutamatergic neuron of the primary motor cortex | 16 |
| lactocyte | 18 |
| lamellocyte | 7 |
| lamp5 GABAergic cortical interneuron | 182 |
| Langerhans cell | 92 |
| large intestine crypt goblet cell | 1 |
| large intestine goblet cell | 9 |
| large luteal cell | 1 |
| large pre-B-II cell | 9 |
| late pro-B cell | 6 |
| late promyelocyte | 3 |
| late spermatid | 25 |
| lateral mesodermal cell | 1 |
| lens epithelial cell | 2 |
| lens fiber cell | 4 |
| leptomeningeal cell | 55 |
| leucophore | 4 |
| leukocyte | 470 |
| Leydig cell | 88 |
| Leydig stem cell | 3 |
| ligament cell | 1 |
| liver dendritic cell | 2 |
| long term hematopoietic stem cell | 6 |
| luminal adaptive secretory precursor cell of mammary gland | 1 |
| luminal cell of prostate epithelium | 57 |
| luminal endometrial ciliated epithelial cell | 1 |
| luminal epithelial cell of mammary gland | 94 |
| lung ciliated cell | 83 |
| lung endothelial cell | 85 |
| lung goblet cell | 17 |
| lung macrophage | 91 |
| lung microvascular endothelial cell | 1 |
| lung migratory dendritic cell | 1 |
| lung neuroendocrine cell | 11 |
| lung perichondrial fibroblast | 1 |
| lung pericyte | 1 |
| lung resident memory CD4-positive, alpha-beta T cell | 1 |
| lung resident memory CD8-positive, alpha-beta T cell | 1 |
| lung secretory cell | 65 |
| luteal cell | 11 |
| lymph node lymphatic vessel endothelial cell | 7 |
| lymph node marginal reticular cell | 2 |
| lymphatic endothelial cell of medulla ceiling | 4 |
| lymphatic endothelial cell of subcapsular sinus ceiling | 5 |
| lymphatic endothelial cell of subcapsular sinus floor | 2 |
| lymphatic vessel smooth muscle cell | 3 |
| lymphocyte | 165 |
| lymphocyte of B lineage | 2 |
| lymphoid lineage restricted progenitor cell | 25 |
| lymphoid tissue-inducer cell | 3 |
| lysosome-rich enterocyte | 5 |
| M cell of gut | 8 |
| macroglial cell | 2 |
| macrophage | 2757 |
| macrophage dendritic cell progenitor | 10 |
| macrophage derived foam cell | 5 |
| macula densa epithelial cell | 21 |
| male germ cell | 16 |
| male germ line stem cell | 15 |
| male gonocyte | 1 |
| Malpighian tubule stellate cell | 2 |
| mammary gland epithelial cell | 13 |
| mammary gland glandular cell | 3 |
| mammary stem cell | 7 |
| mammillary body neuron | 19 |
| mammotroph | 12 |
| marginal zone B cell of lymph node | 33 |
| marginal zone B cell of spleen | 2 |
| Martinotti neuron | 1 |
| mast cell | 643 |
| mast cell progenitor | 31 |
| mature alpha-beta T cell | 4 |
| mature B cell | 38 |
| mature CD4 single-positive thymocyte | 2 |
| mature CD8 single-positive thymocyte | 2 |
| mature conventional dendritic cell | 32 |
| mature microglial cell | 9 |
| mature natural killer cell | 17 |
| mature neutrophil | 7 |
| mature NK T cell | 255 |
| mature T cell | 8 |
| mechanoreceptor cell | 54 |
| medial ganglionic eminence derived interneuron | 26 |
| medium spiny neuron | 130 |
| medullary thymic epithelial cell | 68 |
| megakaryocyte | 146 |
| megakaryocyte progenitor cell | 43 |
| megakaryocyte-erythroid progenitor cell | 97 |
| meis2 expressing cortical GABAergic cell | 3 |
| melanoblast | 4 |
| melanocyte | 126 |
| melanocyte of skin | 11 |
| melanocyte stimulating hormone secreting cell | 7 |
| memory B cell | 281 |
| memory regulatory T cell | 9 |
| memory T cell | 47 |
| Merkel cell | 5 |
| mesangial cell | 39 |
| mesenchymal cell | 454 |
| mesenchymal stem cell | 87 |
| mesenchymal stem cell of adipose tissue | 11 |
| mesenchymal stem cell of the bone marrow | 1 |
| meso-epithelial cell | 2 |
| mesodermal cell | 108 |
| mesonephric podocyte | 2 |
| mesothelial cell | 178 |
| mesothelial cell of epicardium | 2 |
| mesothelial cell of pleura | 1 |
| metamyelocyte | 2 |
| metanephric mesenchyme stem cell | 3 |
| metanephric podocyte | 2 |
| microfold cell of epithelium of small intestine | 2 |
| microglial cell | 916 |
| microvascular endothelial cell | 20 |
| microvillous olfactory receptor neuron | 1 |
| midbrain dopaminergic neuron | 3 |
| midzonal region hepatocyte | 13 |
| migratory cardiac neural crest cell | 3 |
| migratory enteric neural crest cell | 1 |
| migratory neural crest cell | 10 |
| mitral cell | 7 |
| monocyte | 1379 |
| monocyte-derived dendritic cell | 69 |
| mononuclear cell | 3 |
| mononuclear cytotrophoblast cell | 20 |
| mononuclear phagocyte | 39 |
| morula cell | 1 |
| motor neuron | 80 |
| mucosal invariant T cell | 144 |
| mucous cell of stomach | 16 |
| mucous neck cell | 7 |
| mucous neck cell of gastric gland | 6 |
| mucus secreting cell | 37 |
| mucus secreting cell of trachea gland | 1 |
| mucus secreting cell of tracheobronchial tree submucosal gland | 2 |
| Mueller cell | 56 |
| multi fate stem cell | 40 |
| multi-ciliated epithelial cell | 14 |
| multi-potent skeletal muscle stem cell | 30 |
| mural cell | 118 |
| muscle cell | 264 |
| muscle precursor cell | 10 |
| myelinating glial cell | 1 |
| myelinating Schwann cell | 20 |
| myeloblast | 4 |
| myelocyte | 22 |
| myeloid cell | 315 |
| myeloid dendritic cell | 98 |
| myeloid leukocyte | 2 |
| myeloid lineage restricted progenitor cell | 30 |
| myeloid suppressor cell | 11 |
| myoblast | 59 |
| myocardial endocrine cell | 4 |
| myocyte of sinoatrial node | 6 |
| myoepithelial cell | 35 |
| myoepithelial cell of dilator pupillae | 1 |
| myoepithelial cell of mammary gland | 13 |
| myofibroblast cell | 197 |
| myometrial cell | 5 |
| myotube | 3 |
| naive B cell | 286 |
| naive CCR4-positive regulatory T cell | 1 |
| naive regulatory T cell | 11 |
| naive T cell | 127 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 353 |
| naive thymus-derived CD8-positive, alpha-beta T cell | 257 |
| nasal mucosa goblet cell | 4 |
| natural killer cell | 1288 |
| natural T-regulatory cell | 35 |
| near-projecting glutamatergic cortical neuron | 19 |
| neoplastic cell | 2108 |
| nephrogenic mesenchyme stem cell | 4 |
| nephron tubule epithelial cell | 1 |
| neural cell | 141 |
| neural crest cell | 117 |
| neural progenitor cell | 279 |
| neural stem cell | 101 |
| neurecto-epithelial cell | 5 |
| neurectodermal cell | 3 |
| neuroblast (sensu Nematoda and Protostomia) | 25 |
| neuroblast (sensu Vertebrata) | 353 |
| neuroendocrine cell | 69 |
| neuroepithelial stem cell | 14 |
| neurogliaform cell | 1 |
| neuromast hair cell | 6 |
| neuromast mantle cell | 3 |
| neuromast supporting cell | 13 |
| neuron | 3242 |
| neuron of the dorsal spinal cord | 21 |
| neuron of the forebrain | 1 |
| neuron of the ventral spinal cord | 6 |
| neuronal brush cell | 8 |
| neuronal receptor cell | 5 |
| neuroplacodal cell | 10 |
| neutrophil | 919 |
| neutrophil progenitor cell | 36 |
| neutrophilic myelocyte | 1 |
| nitrergic neuron | 3 |
| nodal myocyte | 1 |
| non-classical monocyte | 148 |
| non-myelinating Schwann cell | 17 |
| non-pigmented ciliary epithelial cell | 5 |
| noradrenergic cell | 6 |
| noradrenergic neuron | 34 |
| notochordal cell | 6 |
| nucleate erythrocyte | 7 |
| nucleated thrombocyte | 6 |
| nucleus pulposus cell of intervertebral disc | 1 |
| odontoblast | 3 |
| oenocyte | 8 |
| OFF-bipolar cell | 19 |
| OFFx cell | 1 |
| olfactory bulb interneuron | 2 |
| olfactory bulb tufted cell | 7 |
| olfactory ensheathing cell | 27 |
| olfactory epithelial cell | 8 |
| olfactory granule cell | 7 |
| olfactory receptor cell | 127 |
| oligodendrocyte | 937 |
| oligodendrocyte precursor cell | 618 |
| ON-bipolar cell | 21 |
| ON-blue cone bipolar cell | 2 |
| oncocyte | 2 |
| ooblast | 1 |
| oocyte | 24 |
| oogonial cell | 4 |
| oral mucosa squamous cell | 1 |
| osteoblast | 84 |
| osteoclast | 29 |
| osteocyte | 9 |
| outer root sheath cell | 5 |
| ovarian surface epithelial cell | 2 |
| oviduct glandular cell | 2 |
| pain receptor cell | 73 |
| pancreas exocrine glandular cell | 3 |
| pancreatic A cell | 64 |
| pancreatic acinar cell | 74 |
| pancreatic centro-acinar cell | 1 |
| pancreatic D cell | 45 |
| pancreatic ductal cell | 126 |
| pancreatic endocrine cell | 35 |
| pancreatic epsilon cell | 18 |
| pancreatic PP cell | 32 |
| pancreatic stellate cell | 36 |
| paneth cell | 74 |
| paneth cell of epithelium of small intestine | 7 |
| papillary tips cell | 1 |
| parafollicular cell | 2 |
| parasympathetic neuron | 1 |
| parathyroid glandular cell | 3 |
| paraxial cell | 21 |
| parietal cell | 26 |
| parietal epithelial cell | 39 |
| peptic cell | 38 |
| peptidergic neuron | 65 |
| pericardial nephrocyte | 2 |
| pericyte | 748 |
| peridermal cell | 14 |
| periglomerular cell | 4 |
| perineuronal satellite cell | 10 |
| peripheral blood mononuclear cell | 300 |
| peripheral nervous system neuron | 9 |
| peripheral sensory neuron | 2 |
| periportal region hepatocyte | 11 |
| peritoneal macrophage | 13 |
| peritubular capillary endothelial cell | 5 |
| peritubular myoid cell | 32 |
| perivascular cell | 12 |
| perivascular macrophage | 62 |
| phagocyte | 8 |
| photoreceptor cell | 53 |
| pigment cell | 36 |
| pigmented ciliary epithelial cell | 6 |
| pigmented epithelial cell | 1 |
| pillar cell | 10 |
| pinealocyte | 6 |
| pituicyte | 3 |
| pituitary gland cell | 21 |
| placental amniotic mesenchymal stromal cell | 2 |
| placental hematopoietic stem cell | 1 |
| placental villous trophoblast | 29 |
| plasma cell | 681 |
| plasmablast | 105 |
| plasmacytoid dendritic cell | 517 |
| plasmatocyte | 78 |
| platelet | 111 |
| pluripotent stem cell | 19 |
| pneumocyte | 26 |
| podocyte | 120 |
| polar body | 2 |
| pole cell | 4 |
| polymodal nocireceptor | 1 |
| PP cell | 3 |
| pre-B-I cell | 1 |
| pre-conventional dendritic cell | 2 |
| pre-natural killer cell | 1 |
| preadipocyte | 38 |
| preameloblast | 2 |
| prechondroblast | 4 |
| precursor B cell | 87 |
| precursor cell | 151 |
| premigratory neural crest cell | 2 |
| preodontoblast | 2 |
| preosteoblast | 12 |
| prickle cell | 29 |
| primary follicular cell of ovary | 3 |
| primary lens fiber | 1 |
| primary motor neuron (sensu Teleostei) | 10 |
| primary neuron (sensu Teleostei) | 1 |
| primary spermatocyte | 3 |
| primitive erythroid lineage cell | 4 |
| primitive erythroid progenitor | 5 |
| primitive red blood cell | 73 |
| primordial germ cell | 45 |
| pro-B cell | 127 |
| pro-NK cell | 10 |
| pro-T cell | 15 |
| procrystal cell | 1 |
| proerythroblast | 10 |
| professional antigen presenting cell | 18 |
| progenitor cell | 170 |
| progenitor cell of endocrine pancreas | 39 |
| progenitor cell of mammary luminal epithelium | 5 |
| prohemocyte (sensu Nematoda and Protostomia) | 9 |
| promonocyte | 21 |
| promyelocyte | 17 |
| pronephric nephron tubule epithelial cell | 1 |
| prostate gland microvascular endothelial cell | 3 |
| prostate stem cell | 1 |
| pulmonary artery endothelial cell | 2 |
| pulmonary capillary endothelial cell | 1 |
| pulmonary interstitial fibroblast | 12 |
| pulmonary ionocyte | 2 |
| Purkinje cell | 88 |
| Purkinje myocyte | 2 |
| pvalb GABAergic cortical interneuron | 212 |
| pyramidal neuron | 153 |
| R1 photoreceptor cell | 1 |
| R2 photoreceptor cell | 5 |
| R3 photoreceptor cell | 5 |
| R4 photoreceptor cell | 5 |
| R5 photoreceptor cell | 5 |
| R6 photoreceptor cell | 5 |
| R7 photoreceptor cell | 9 |
| R8 photoreceptor cell | 5 |
| radial glial cell | 519 |
| rectum glandular cell | 2 |
| red sensitive photoreceptor cell | 2 |
| regular atrial cardiac myocyte | 32 |
| regular ventricular cardiac myocyte | 27 |
| regulatory B cell | 2 |
| regulatory T cell | 646 |
| renal alpha-intercalated cell | 52 |
| renal beta-intercalated cell | 54 |
| renal intercalated cell | 45 |
| renal interstitial pericyte | 6 |
| renal medullary fibroblast | 5 |
| renal principal cell | 58 |
| respiratory basal cell | 34 |
| respiratory ciliated cell | 3 |
| respiratory epithelial cell | 27 |
| respiratory goblet cell | 25 |
| resting double-positive thymocyte | 4 |
| reticular cell | 11 |
| reticulocyte | 6 |
| retina horizontal cell | 49 |
| retinal bipolar neuron | 36 |
| retinal blood vessel endothelial cell | 5 |
| retinal cell | 27 |
| retinal cone cell | 41 |
| retinal ganglion cell | 255 |
| retinal melanocyte | 1 |
| retinal pigment epithelial cell | 44 |
| retinal progenitor cell | 39 |
| retinal rod cell | 40 |
| rod bipolar cell | 23 |
| Rohon-Beard neuron | 1 |
| rosehip neuron | 11 |
| S cone cell | 1 |
| salivary gland cell | 32 |
| salivary gland glandular cell | 26 |
| Schwann cell | 185 |
| Schwann cell precursor | 17 |
| seam cell | 18 |
| sebaceous gland cell | 21 |
| sebum secreting cell | 1 |
| secondary follicular cell of ovary | 3 |
| secondary spermatocyte | 1 |
| secretory cell | 173 |
| seminal vesicle glandular cell | 3 |
| sensory epithelial cell | 1 |
| sensory hair cell | 8 |
| sensory neuron | 72 |
| sensory neuron of dorsal root ganglion | 8 |
| sensory receptor cell | 4 |
| serotonergic neuron | 80 |
| serous cell of epithelium of bronchus | 1 |
| serous cell of epithelium of trachea | 1 |
| serous secreting cell | 15 |
| serous secreting cell of bronchus submucosal gland | 2 |
| Sertoli cell | 86 |
| sheath cell | 8 |
| sheath cell (sensu Nematoda) | 3 |
| short term hematopoietic stem cell | 5 |
| simple columnar epithelial cell | 1 |
| skeletal muscle fiber | 9 |
| skeletal muscle myoblast | 6 |
| skeletal muscle satellite cell | 24 |
| skeletal muscle satellite stem cell | 4 |
| skin fibroblast | 77 |
| Slamf1-negative multipotent progenitor cell | 1 |
| Slamf1-positive multipotent progenitor cell | 1 |
| slow muscle cell | 13 |
| slowly adapting mechanoreceptor cell | 9 |
| small intestine glandular cell | 1 |
| small intestine goblet cell | 16 |
| small luteal cell | 1 |
| small pre-B-II cell | 8 |
| smooth muscle cell | 725 |
| smooth muscle cell of bladder | 2 |
| smooth muscle cell of prostate | 7 |
| smooth muscle cell of sphincter of pupil | 2 |
| smooth muscle cell of the brain vasculature | 13 |
| smooth muscle cell of the coronary artery | 3 |
| smooth muscle cell of the esophagus | 1 |
| smooth muscle cell of the pulmonary artery | 4 |
| smooth muscle cell of trachea | 2 |
| smooth muscle myoblast | 37 |
| sncg GABAergic cortical interneuron | 87 |
| somatic muscle cell | 11 |
| somatic stem cell | 4 |
| somatomotor neuron | 7 |
| somatotroph | 10 |
| sperm | 29 |
| spermatid | 130 |
| spermatocyte | 164 |
| spermatogonium | 107 |
| spinal cord interneuron | 10 |
| spinal cord motor neuron | 21 |
| spinal cord oligodendrocyte | 2 |
| spiral ganglion neuron | 43 |
| splanchnic mesodermal cell | 4 |
| splenic endothelial cell | 1 |
| splenic macrophage | 1 |
| splenic red pulp macrophage | 2 |
| splenocyte | 28 |
| spongiotrophoblast cell | 9 |
| squamous epithelial cell | 82 |
| sst chodl GABAergic cortical interneuron | 5 |
| sst GABAergic cortical interneuron | 435 |
| starburst amacrine cell | 1 |
| stem cell | 161 |
| stem cell of epidermis | 3 |
| steroid hormone secreting cell | 5 |
| stomach enteroendocrine cell | 1 |
| stomach neuroendocrine cell | 1 |
| stratified epithelial cell | 1 |
| stratified squamous epithelial cell | 3 |
| stretch receptor cell | 1 |
| strial basal cell | 6 |
| strial intermediate cell | 7 |
| strial marginal cell | 8 |
| striated muscle cell | 2 |
| striatum neuron | 1 |
| stromal cell | 603 |
| stromal cell of bone marrow | 9 |
| stromal cell of endometrium | 19 |
| stromal cell of ovarian cortex | 1 |
| stromal cell of ovary | 14 |
| supporting cell | 19 |
| supporting cell of cochlea | 2 |
| suppressor macrophage | 3 |
| suprabasal keratinocyte | 5 |
| surface ectodermal cell | 6 |
| surface mucosal cell of stomach | 6 |
| sustentacular cell | 4 |
| sweat secreting cell | 5 |
| sympathetic neuron | 3 |
| syncytiotrophoblast cell | 36 |
| synovial cell | 1 |
| T cell | 1339 |
| T follicular helper cell | 160 |
| T follicular regulatory cell | 6 |
| T-helper 1 cell | 145 |
| T-helper 17 cell | 112 |
| T-helper 2 cell | 73 |
| T-helper 22 cell | 6 |
| tanycyte | 67 |
| taste receptor cell | 4 |
| Tc1 cell | 1 |
| Tc17 cell | 2 |
| tear secreting cell | 1 |
| tendon cell | 49 |
| terminal Schwann cell | 1 |
| thalamic excitatory neuron | 18 |
| theca cell | 12 |
| thecogen cell | 1 |
| thermoreceptor cell | 9 |
| thymic macrophage | 4 |
| thymocyte | 101 |
| thyroid follicular cell | 14 |
| thyrotroph | 8 |
| tip cell | 6 |
| tissue-resident macrophage | 22 |
| tongue muscle cell | 1 |
| tonsil germinal center B cell | 14 |
| tormogen cell | 2 |
| touch receptor cell | 3 |
| Tr1 cell | 2 |
| tracheal epithelial cell | 9 |
| tracheal goblet cell | 1 |
| tracheobronchial serous cell | 1 |
| tracheobronchial smooth muscle cell | 12 |
| transit amplifying cell | 88 |
| transit amplifying cell of colon | 6 |
| transit amplifying cell of small intestine | 1 |
| transitional epithelial cell | 8 |
| transitional stage B cell | 40 |
| transporting cell | 1 |
| trigeminal neuron | 2 |
| trophectodermal cell | 6 |
| trophoblast cell | 39 |
| trophoblast giant cell | 20 |
| tuft cell of colon | 6 |
| type 1 cone bipolar cell (sensu Mus) | 3 |
| type 1 spiral ganglion neuron | 3 |
| type 2 cone bipolar cell (sensu Mus) | 3 |
| type 2 spiral ganglion neuron | 1 |
| type 3 cone bipolar cell (sensu Mus) | 5 |
| type 4 cone bipolar cell (sensu Mus) | 4 |
| type 5 cone bipolar cell (sensu Mus) | 3 |
| type 6 cone bipolar cell (sensu Mus) | 3 |
| type 7 cone bipolar cell (sensu Mus) | 1 |
| type 8 cone bipolar cell (sensu Mus) | 1 |
| type 9 cone bipolar cell (sensu Mus) | 3 |
| type A cell of stomach | 2 |
| type B pancreatic cell | 85 |
| type B synovial cell | 9 |
| type D cell of stomach | 2 |
| type D enteroendocrine cell | 5 |
| type EC enteroendocrine cell | 19 |
| type G enteroendocrine cell | 6 |
| type I cell of adrenal cortex | 2 |
| type I cell of adrenal medulla | 1 |
| type I cell of carotid body | 2 |
| type I enteroendocrine cell | 2 |
| type I muscle cell | 10 |
| type I NK T cell | 35 |
| type I pneumocyte | 150 |
| type II cell of adrenal cortex | 1 |
| type II cell of adrenal medulla | 2 |
| type II muscle cell | 34 |
| type II pneumocyte | 189 |
| type IIa muscle cell | 26 |
| type IIb muscle cell | 62 |
| type L enteroendocrine cell | 4 |
| type M enteroendocrine cell | 2 |
| type N enteroendocrine cell | 1 |
| type S enteroendocrine cell | 3 |
| type X enteroendocrine cell | 2 |
| unipolar brush cell | 26 |
| unswitched memory B cell | 34 |
| ureteric bud cell | 1 |
| urethra cell | 2 |
| urothelial cell | 44 |
| uterine cervix glandular cell | 1 |
| uterine cervix squamous cell | 5 |
| uterine smooth muscle cell | 5 |
| UV cone cell | 1 |
| vacuolated fetal-type enterocyte | 1 |
| vagina squamous cell | 1 |
| valve endothelial cell | 2 |
| vasa recta ascending limb cell | 4 |
| vasa recta cell | 12 |
| vasa recta descending limb cell | 4 |
| vascular associated smooth muscle cell | 243 |
| vascular leptomeningeal cell | 103 |
| vein endothelial cell | 201 |
| vein endothelial cell of respiratory system | 3 |
| ventricular cardiac muscle cell | 19 |
| vertebrate lens cell | 2 |
| vestibular dark cell | 2 |
| vestibular hair cell | 1 |
| vip GABAergic cortical interneuron | 385 |
| visceral muscle cell | 4 |
| visceromotor neuron | 28 |
| visual pigment cell (sensu Nematoda and Protostomia) | 7 |
| vomeronasal sensory neuron | 3 |
| white adipocyte | 14 |
| xanthoblast | 6 |
| xanthophore cell | 22 |
| yolk cell | 16 |
| yolk sac hematopoietic stem cell | 1 |